Os11g0224600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0224600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.38 | 0.35 | 2.84 | -0.349 | 0.0491 | 0.797 | 0.292 | -6.83 | 0.0981 | 10.2 | 30.8 | 10 | -- | -- |
| 59.62 | 0.362 | 2.79 | 0.0631 | 0.065 | 0.134 | 0.253 | -- | 0.0957 | 9.22 | 30.8 | 10 | -- | -- |
| 55.66 | 0.347 | 2.83 | -0.33 | 0.0578 | 0.801 | -- | -6.72 | 0.0992 | 8.06 | 30.74 | 7 | -- | -- |
| 59.72 | 0.36 | 2.79 | 0.0804 | 0.073 | 0.159 | -- | -- | 0.0944 | 8.05 | 31.2 | 3 | -- | -- |
| 55.83 | 0.348 | 2.84 | -0.325 | -- | 0.797 | -- | -6.72 | 0.099 | -- | 30.8 | 7 | -- | -- |
| 60.06 | 0.363 | 2.8 | 0.0735 | 0.0632 | -- | 0.256 | -- | 0.0861 | 10.4 | -- | -- | -- | -- |
| 60.31 | 0.364 | 2.8 | 0.0832 | 0.0641 | -- | -- | -- | 0.0865 | 9.64 | -- | -- | -- | -- |
| 59.98 | 0.361 | 2.8 | 0.0718 | -- | 0.159 | -- | -- | 0.0968 | -- | 31.25 | 3 | -- | -- |
| 59.84 | 0.36 | 2.8 | -- | 0.0703 | 0.167 | -- | -- | 0.0871 | 7.87 | 31.24 | 7 | -- | -- |
| 60.56 | 0.364 | 2.8 | 0.0827 | -- | -- | -- | -- | 0.0866 | -- | -- | -- | -- | -- |
| 60.5 | 0.364 | 2.8 | -- | 0.0639 | -- | -- | -- | 0.0772 | 9.54 | -- | -- | -- | -- |
| 60.11 | 0.361 | 2.8 | -- | -- | 0.165 | -- | -- | 0.0894 | -- | 31.25 | 7 | -- | -- |
| 60.74 | 0.364 | 2.8 | -- | -- | -- | -- | -- | 0.0774 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.34 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 2 | 55.37 | temperature | 30.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 3 | 55.37 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 55.38 | temperature | 30.0 | 10 | > th | dose independent | rect. | 10 | 2 |
| 57 | 55.61 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 165 | 56.03 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 22 |
| 184 | 56.11 | temperature | 30.0 | 30 | > th | dose independent | sin | 7 | NA |
| 367 | 56.79 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 371 | 56.85 | temperature | 30.0 | 30 | < th | dose independent | sin | 5 | NA |
| 475 | 57.12 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 537 | 57.19 | temperature | 30.0 | 10 | > th | dose dependent | no | NA | NA |
| 686 | 57.35 | temperature | 25.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 719 | 57.37 | temperature | 30.0 | 30 | > th | dose independent | no | NA | NA |
| 829 | 57.38 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 860 | 57.56 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 865 | 57.56 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 869 | 57.57 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 871 | 57.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 874 | 57.57 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 878 | 57.57 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 887 | 57.57 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 888 | 57.57 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 889 | 57.57 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 901 | 57.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 908 | 57.58 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 943 | 57.61 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 945 | 57.62 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 946 | 57.62 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 950 | 57.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 952 | 57.62 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 953 | 57.62 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 957 | 57.62 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 958 | 57.62 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 959 | 57.62 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 961 | 57.62 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 966 | 57.62 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 968 | 57.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 969 | 57.62 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 972 | 57.62 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 974 | 57.62 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 978 | 57.62 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 985 | 57.63 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |