Os11g0220700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0220700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.71 | 0.277 | 10.9 | -0.531 | 0.402 | -0.974 | 0.0132 | 0.924 | -0.289 | 1.71 | 25.3 | 108 | -- | -- |
| 35.77 | 0.279 | 10.9 | -0.388 | 0.413 | -1.06 | 0.302 | -- | -0.26 | 1.68 | 25.21 | 113 | -- | -- |
| 34.71 | 0.274 | 10.9 | -0.533 | 0.401 | -0.972 | -- | 0.939 | -0.289 | 1.7 | 25.31 | 109 | -- | -- |
| 36.09 | 0.28 | 10.9 | -0.399 | 0.403 | -1.06 | -- | -- | -0.261 | 1.85 | 25.2 | 140 | -- | -- |
| 39.98 | 0.294 | 10.9 | -0.651 | -- | -0.85 | -- | 1.33 | -0.291 | -- | 24.78 | 1583 | -- | -- |
| 51.77 | 0.337 | 10.9 | -0.126 | 0.221 | -- | 0.293 | -- | -0.0473 | 1.05 | -- | -- | -- | -- |
| 52.13 | 0.338 | 10.9 | -0.137 | 0.221 | -- | -- | -- | -0.049 | 1.18 | -- | -- | -- | -- |
| 40.95 | 0.298 | 10.9 | -0.459 | -- | -1.17 | -- | -- | -0.232 | -- | 22.9 | 1540 | -- | -- |
| 39.86 | 0.294 | 10.9 | -- | 0.361 | -0.906 | -- | -- | -0.203 | 1.58 | 25.12 | 122 | -- | -- |
| 55.16 | 0.347 | 10.9 | -0.128 | -- | -- | -- | -- | -0.0445 | -- | -- | -- | -- | -- |
| 52.62 | 0.339 | 10.9 | -- | 0.219 | -- | -- | -- | -0.0338 | 1.15 | -- | -- | -- | -- |
| 45.77 | 0.315 | 10.9 | -- | -- | -0.742 | -- | -- | -0.172 | -- | 26.1 | 1057 | -- | -- |
| 55.6 | 0.348 | 10.8 | -- | -- | -- | -- | -- | -0.0303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 7 | 34.24 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 20 | 34.83 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 29 | 34.95 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 30 | 34.98 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 31 | 35.00 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 33 | 35.00 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 37 | 35.02 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 38 | 35.02 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 40 | 35.02 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 41 | 35.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 75 | 35.37 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 77 | 35.42 | wind | 9 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 120 | 35.92 | wind | 9 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 125 | 35.95 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 142 | 36.13 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 143 | 36.13 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 179 | 36.32 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 13 |
| 191 | 36.37 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 196 | 36.38 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 201 | 36.40 | wind | 9 | 14400 | < th | dose independent | sin | 6 | NA |
| 211 | 36.45 | wind | 9 | 14400 | > th | dose independent | sin | 7 | NA |
| 229 | 36.52 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 257 | 36.67 | wind | 9 | 14400 | > th | dose dependent | sin | 6 | NA |
| 306 | 36.87 | temperature | 25 | 1440 | < th | dose dependent | sin | 18 | NA |
| 330 | 36.91 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 374 | 37.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 379 | 37.03 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 388 | 37.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 412 | 37.06 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 9 |
| 489 | 37.14 | temperature | 20 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 523 | 37.18 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 547 | 37.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 561 | 37.25 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 13 |
| 579 | 37.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 601 | 37.30 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 608 | 37.31 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 622 | 37.33 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 650 | 37.36 | temperature | 20 | 4320 | < th | dose dependent | sin | 4 | NA |
| 697 | 37.41 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 708 | 37.43 | temperature | 25 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 828 | 37.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 852 | 37.62 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 860 | 37.63 | radiation | 1 | 4320 | < th | dose dependent | rect. | 6 | 10 |
| 891 | 37.67 | temperature | 20 | 30 | > th | dose independent | rect. | 6 | 23 |
| 922 | 37.71 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 974 | 37.76 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 4 |