Os11g0220300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0220300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 296.96 | 0.81 | 5.76 | -3.51 | 0.000499 | -0.729 | 0.852 | -3.87 | 0.862 | 22.7 | 33.41 | 3008 | -- | -- |
| 314.55 | 0.826 | 5.76 | -3.12 | 0.0549 | -0.837 | 0.971 | -- | 0.939 | 23 | 29.55 | 2801 | -- | -- |
| 299.83 | 0.806 | 5.76 | -3.54 | 0.0116 | -0.712 | -- | -3.92 | 0.858 | 10 | 32.88 | 3083 | -- | -- |
| 318.37 | 0.831 | 5.75 | -3.15 | 0.0235 | -0.854 | -- | -- | 0.966 | 22.5 | 30 | 2800 | -- | -- |
| 299.84 | 0.806 | 5.76 | -3.54 | -- | -0.714 | -- | -3.92 | 0.861 | -- | 33.09 | 3083 | -- | -- |
| 336.03 | 0.859 | 5.78 | -3.15 | 0.0668 | -- | -0.939 | -- | 0.85 | 10.6 | -- | -- | -- | -- |
| 339.64 | 0.863 | 5.78 | -3.19 | 0.0747 | -- | -- | -- | 0.848 | 12 | -- | -- | -- | -- |
| 318.41 | 0.831 | 5.75 | -3.15 | -- | -0.85 | -- | -- | 0.965 | -- | 30.01 | 2800 | -- | -- |
| 578.47 | 1.12 | 5.65 | -- | 0.031 | -1.08 | -- | -- | 1.34 | 22.5 | 30 | 2677 | -- | -- |
| 339.99 | 0.862 | 5.78 | -3.19 | -- | -- | -- | -- | 0.847 | -- | -- | -- | -- | -- |
| 607.24 | 1.15 | 5.7 | -- | 0.125 | -- | -- | -- | 1.2 | 13.5 | -- | -- | -- | -- |
| 578.4 | 1.12 | 5.66 | -- | -- | -0.995 | -- | -- | 1.35 | -- | 30 | 2677 | -- | -- |
| 608.21 | 1.15 | 5.7 | -- | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 282.64 | radiation | 40 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 20 | 287.11 | radiation | 30 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 37 | 287.78 | radiation | 40 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 54 | 287.99 | radiation | 40 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 56 | 288.01 | radiation | 40 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 60 | 288.03 | radiation | 40 | 4320 | < th | dose independent | rect. | 17 | 17 |
| 62 | 288.06 | radiation | 40 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 120 | 289.14 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 124 | 289.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 128 | 289.33 | radiation | 1 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 130 | 289.36 | radiation | 1 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 134 | 289.60 | radiation | 40 | 4320 | > th | dose independent | sin | 11 | NA |
| 135 | 289.64 | radiation | 1 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 314 | 291.76 | radiation | 1 | 1440 | > th | dose independent | sin | 8 | NA |
| 315 | 291.77 | radiation | 1 | 1440 | < th | dose independent | sin | 8 | NA |
| 380 | 292.69 | radiation | 30 | 4320 | > th | dose dependent | sin | 11 | NA |
| 434 | 293.60 | radiation | 40 | 4320 | < th | dose independent | sin | 11 | NA |
| 528 | 295.16 | radiation | 30 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 561 | 295.46 | radiation | 40 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 656 | 296.47 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 671 | 296.58 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 680 | 296.68 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 687 | 296.70 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 715 | 297.01 | humidity | 80 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 716 | 297.03 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 717 | 297.04 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 720 | 297.13 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 740 | 297.25 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 747 | 297.36 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 16 |
| 748 | 297.37 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 753 | 297.41 | radiation | 40 | 4320 | < th | dose dependent | rect. | 2 | 8 |
| 760 | 297.43 | radiation | 40 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 774 | 297.45 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 777 | 297.46 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 790 | 297.60 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 793 | 297.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 806 | 297.72 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 10 |
| 826 | 297.86 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 882 | 298.11 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 951 | 298.42 | humidity | 70 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 952 | 298.42 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 994 | 298.60 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 4 |