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Os11g0216100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Chaperone protein dnaJ.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.1 (0.025) R2 : 0.885
β1 : -0.873 (0.0912) R2dD : 0.0243 R2D : 0.0216
β2 : 4.26 (0.0764) R2dC : 1.21 R2C : -0.0268
β3 : 3.35 (0.07) R2dE : 0.884 R2E : -0.349
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.124 (0.0532) R2dN8 : 0.00204 R2N8 : -0.00657
σ : 0.466
deviance : 100.09
__
_____
C
peak time of C : 9.27
E
wheather : radiation
threshold : 0.2124
memory length : 261
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 8.86
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.12 0.456 14.1 -1.02 4.31 3.41 2.05 1.3 -0.141 9.38 1.354 271 8.75 --
97.33 0.459 14.1 -0.967 4.34 3.43 0.929 -- -0.136 9.39 1.267 266 8.66 --
100.85 0.468 14 -0.85 4.18 3.32 -- 0.157 -0.127 9.21 0.1102 269 9.11 --
100.09 0.466 14.1 -0.873 4.26 3.35 -- -- -0.124 9.27 0.2124 261 8.86 --
145.6 0.562 14.2 -1.25 -- 4.01 -- 3.05 -0.343 -- 14.97 803 6.94 --
164.51 0.601 14.1 -1.09 3.6 -- 1.95 -- -0.257 5.99 -- -- -- --
173.86 0.617 14.1 -1.07 3.61 -- -- -- -0.265 5.97 -- -- -- --
141.53 0.554 14.2 -0.721 -- 4.83 -- -- -0.0965 -- 0.7118 886 8.81 --
120.22 0.511 14 -- 4.31 3.46 -- -- -0.0549 9.34 0.06 283 9.31 --
848.26 1.36 14.2 -0.962 -- -- -- -- -0.182 -- -- -- -- --
203.97 0.668 14.1 -- 3.59 -- -- -- -0.146 5.99 -- -- -- --
157.05 0.584 14.2 -- -- 4.87 -- -- -0.0364 -- 0.01306 888 8.86 --
872.69 1.38 14.2 -- -- -- -- -- -0.0755 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.50 temperature 25.0 270 > th dose independent rect. 13 6
2 92.04 temperature 25.0 270 > th dose independent rect. 14 4
3 92.50 radiation 1.0 270 > th dose independent rect. 14 16
6 93.48 temperature 10.0 270 > th dose dependent rect. 13 6
14 94.72 radiation 1.0 270 < th dose dependent sin 15 NA
17 94.92 radiation 1.0 270 < th dose independent sin 14 NA
19 95.35 radiation 1.0 270 > th dose independent sin 14 NA
22 95.89 radiation 1.0 270 > th dose independent rect. 14 4
37 97.39 temperature 10.0 270 > th dose dependent rect. 13 19
65 98.49 temperature 15.0 90 > th dose dependent rect. 15 6
69 98.69 humidity 90.0 270 < th dose independent rect. 14 3
72 98.91 humidity 90.0 270 < th dose independent rect. 13 6
91 100.40 temperature 10.0 90 > th dose dependent rect. 15 18
92 100.41 temperature 10.0 270 > th dose independent rect. 13 6
94 100.41 atmosphere 1010.0 270 < th dose independent rect. 13 6
96 100.41 temperature 10.0 270 > th dose independent rect. 19 18
97 100.41 atmosphere 995.0 270 > th dose independent rect. 19 18
98 100.45 wind 9.0 270 < th dose independent rect. 13 6
101 100.62 wind 1.0 270 > th dose independent rect. 13 6
105 100.73 wind 9.0 270 < th dose independent rect. 19 18
107 100.80 precipitation 0.1 270 < th dose independent rect. 13 6
108 100.80 precipitation 0.1 270 < th dose dependent rect. 13 6
114 101.28 radiation 1.0 270 < th dose dependent rect. 15 12
130 102.52 radiation 1.0 270 < th dose independent rect. 15 12
131 102.62 radiation 1.0 270 < th dose dependent rect. 7 20
134 102.67 atmosphere 995.0 270 > th dose independent rect. 13 6
135 102.75 wind 1.0 270 > th dose independent rect. 14 3
137 102.78 wind 9.0 270 < th dose independent rect. 14 4
138 102.79 temperature 10.0 270 > th dose independent rect. 14 4
140 102.79 atmosphere 1010.0 270 < th dose independent rect. 14 4
142 102.79 temperature 10.0 270 > th dose independent rect. 18 20
143 102.81 temperature 10.0 10 > th dose dependent rect. 16 18
156 102.98 precipitation 0.1 270 < th dose independent rect. 19 18
157 102.98 radiation 1.0 270 < th dose dependent rect. 9 18
158 102.98 precipitation 0.1 270 < th dose dependent rect. 19 18
163 103.08 atmosphere 995.0 270 > th dose independent rect. 18 20
167 103.13 precipitation 0.1 270 < th dose independent rect. 14 4
168 103.13 precipitation 0.1 270 < th dose dependent rect. 14 4
173 103.19 wind 9.0 270 < th dose independent rect. 18 20
188 103.59 temperature 10.0 270 > th dose independent rect. 7 7
189 103.59 atmosphere 995.0 270 > th dose independent rect. 7 7
190 103.59 atmosphere 1015.0 270 < th dose independent rect. 7 7
191 103.59 temperature 10.0 270 > th dose independent rect. 14 17
198 103.68 wind 9.0 270 < th dose independent rect. 14 17
214 103.76 radiation 1.0 270 < th dose independent rect. 7 20
219 103.90 precipitation 0.1 270 < th dose independent rect. 14 17
221 103.90 precipitation 0.1 270 < th dose dependent rect. 14 17
222 104.00 wind 9.0 270 < th dose independent rect. 7 7
229 104.12 temperature 15.0 10 > th dose dependent rect. 16 5
230 104.13 radiation 1.0 270 < th dose independent rect. 9 18
237 104.26 precipitation 0.1 270 < th dose independent rect. 7 7
238 104.26 precipitation 0.1 270 < th dose dependent rect. 7 7
240 104.28 wind 1.0 270 > th dose dependent rect. 14 3
246 104.42 radiation 40.0 270 < th dose independent rect. 15 2
255 104.51 atmosphere 995.0 270 > th dose independent rect. 14 3
266 104.64 precipitation 0.1 270 < th dose independent rect. 13 19
267 104.64 precipitation 0.1 270 < th dose dependent rect. 13 19
272 104.80 temperature 10.0 270 > th dose independent rect. 8 5
273 104.80 atmosphere 995.0 270 > th dose independent rect. 8 5
274 104.80 atmosphere 1015.0 270 < th dose independent rect. 8 5
275 104.80 temperature 10.0 270 > th dose independent rect. 13 19
277 104.82 radiation 1.0 270 > th dose dependent rect. 14 18
284 104.86 precipitation 0.1 270 < th dose independent rect. 8 5
285 104.86 precipitation 0.1 270 < th dose dependent rect. 8 5
288 104.98 wind 9.0 270 < th dose independent rect. 13 19
290 105.02 humidity 50.0 270 > th dose independent rect. 19 18
291 105.04 wind 1.0 270 > th dose independent rect. 19 18
296 105.14 wind 9.0 270 < th dose independent rect. 8 5
313 105.40 precipitation 0.1 270 < th dose independent rect. 18 20
314 105.40 precipitation 0.1 270 < th dose dependent rect. 18 20
355 105.90 radiation 1.0 270 > th dose independent rect. 8 5
393 106.28 atmosphere 995.0 270 > th dose independent rect. 14 17
398 106.32 radiation 1.0 270 > th dose dependent sin 13 NA
409 106.46 wind 1.0 270 > th dose independent rect. 8 5
444 107.08 atmosphere 995.0 270 > th dose independent rect. 13 19
454 107.19 radiation 1.0 270 > th dose independent rect. 7 7
455 107.24 temperature 30.0 270 < th dose dependent rect. 9 16
456 107.29 temperature 30.0 270 < th dose independent rect. 19 18
515 107.70 humidity 60.0 270 > th dose independent rect. 18 9
525 107.75 precipitation 0.1 270 < th dose independent rect. 3 15
526 107.75 precipitation 0.1 270 < th dose dependent rect. 3 15
530 107.79 radiation 40.0 90 < th dose independent rect. 15 6
546 107.94 temperature 10.0 270 > th dose independent rect. 18 9
548 107.94 radiation 20.0 270 < th dose independent rect. 18 9
551 107.94 temperature 10.0 270 > th dose independent rect. 3 15
552 107.94 atmosphere 1015.0 270 < th dose independent rect. 3 15
554 107.98 radiation 40.0 270 < th dose dependent rect. 18 9
557 108.00 wind 9.0 270 < th dose independent rect. 18 9
570 108.13 wind 9.0 270 < th dose independent rect. 3 15
594 108.43 radiation 40.0 90 < th dose independent rect. 15 18
597 108.46 radiation 1.0 270 > th dose dependent rect. 15 2
599 108.49 humidity 50.0 270 > th dose independent rect. 8 5
601 108.49 atmosphere 1015.0 270 < th dose independent rect. 13 19
604 108.52 atmosphere 995.0 270 > th dose independent rect. 18 9
608 108.55 temperature 10.0 10 > th dose independent rect. 10 6
610 108.55 atmosphere 1015.0 10 < th dose independent rect. 10 6
611 108.55 precipitation 0.1 10 < th dose independent rect. 10 6
612 108.55 temperature 10.0 10 > th dose independent rect. 16 18
613 108.55 precipitation 0.1 10 < th dose dependent rect. 10 6
621 108.62 atmosphere 995.0 10 > th dose independent rect. 10 6
634 108.75 precipitation 0.1 10 < th dose independent rect. 16 18
636 108.75 precipitation 0.1 10 < th dose dependent rect. 16 18
641 108.83 wind 9.0 10 < th dose independent rect. 16 18
650 108.89 atmosphere 1015.0 270 < th dose independent rect. 14 17
665 109.02 atmosphere 995.0 10 > th dose independent rect. 16 18
666 109.03 humidity 60.0 270 > th dose independent rect. 23 10
679 109.16 temperature 30.0 270 < th dose independent rect. 18 9
680 109.17 precipitation 0.1 270 < th dose independent rect. 23 10
681 109.17 precipitation 0.1 270 < th dose dependent rect. 23 10
683 109.18 temperature 10.0 10 > th dose dependent rect. 16 16
684 109.19 radiation 1.0 270 > th dose dependent rect. 14 4
685 109.22 radiation 40.0 270 < th dose independent rect. 19 19
688 109.25 temperature 10.0 270 > th dose dependent rect. 3 16
714 109.39 wind 9.0 10 < th dose independent rect. 10 6
718 109.40 temperature 10.0 270 > th dose independent rect. 23 10
720 109.40 atmosphere 995.0 270 > th dose independent rect. 23 10
721 109.40 temperature 10.0 270 > th dose independent rect. 9 14
724 109.42 wind 9.0 270 < th dose independent rect. 23 10
725 109.46 temperature 20.0 10 > th dose independent rect. 16 5
731 109.50 humidity 50.0 270 > th dose independent rect. 7 7
741 109.62 atmosphere 1015.0 270 < th dose independent rect. 24 9
764 109.73 atmosphere 1015.0 10 < th dose independent rect. 16 18
890 110.47 temperature 30.0 270 < th dose independent rect. 8 6
891 110.48 precipitation 0.1 270 < th dose independent rect. 18 9
893 110.48 precipitation 0.1 270 < th dose dependent rect. 18 9
906 110.64 wind 9.0 270 < th dose independent rect. 9 15
949 110.89 temperature 30.0 270 < th dose independent rect. 24 8
968 110.99 radiation 40.0 270 < th dose independent rect. 24 8
992 111.19 precipitation 0.1 10 < th dose independent rect. 16 5
995 111.19 precipitation 0.1 10 < th dose dependent rect. 16 5