Os11g0209400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0209400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.57 | 0.35 | 3.07 | 0.0243 | 0.0889 | 1.61 | 0.121 | -6.37 | 0.0248 | 9.33 | 81.55 | 80 | 19.9 | 12 |
| 58.21 | 0.355 | 3.08 | 0.0379 | 0.0265 | 4.56 | 0.379 | -- | -0.0017 | 12 | 66.93 | 28 | 20.8 | 10.8 |
| 55.58 | 0.347 | 3.07 | 0.0271 | 0.0949 | 1.59 | -- | -6.35 | 0.0262 | 8.44 | 81.6 | 77 | 19.9 | 12 |
| 58.59 | 0.359 | 3.07 | 0.0514 | 0.0661 | 4.5 | -- | -- | 0.0027 | 7.33 | 70.25 | 80 | 20.6 | 11.5 |
| 56.03 | 0.349 | 3.07 | 0.0282 | -- | 1.62 | -- | -6.39 | 0.0249 | -- | 81.59 | 74 | 20 | 12 |
| 78.08 | 0.414 | 3.08 | -0.0317 | 0.0865 | -- | -0.522 | -- | -0.0226 | 4.99 | -- | -- | -- | -- |
| 78.53 | 0.415 | 3.08 | -0.0294 | 0.107 | -- | -- | -- | -0.0196 | 7.4 | -- | -- | -- | -- |
| 58.82 | 0.357 | 3.07 | 0.0529 | -- | 4.53 | -- | -- | 0.00402 | -- | 70.53 | 81 | 21 | 11.3 |
| 58.65 | 0.359 | 3.07 | -- | 0.0668 | 4.48 | -- | -- | -0.00308 | 7.28 | 70.27 | 70 | 20.7 | 11.5 |
| 79.14 | 0.416 | 3.08 | -0.0277 | -- | -- | -- | -- | -0.0179 | -- | -- | -- | -- | -- |
| 78.55 | 0.415 | 3.08 | -- | 0.107 | -- | -- | -- | -0.0164 | 7.42 | -- | -- | -- | -- |
| 58.89 | 0.357 | 3.08 | -- | -- | 4.51 | -- | -- | -0.0019 | -- | 70.51 | 66 | 20.6 | 11.6 |
| 79.16 | 0.415 | 3.08 | -- | -- | -- | -- | -- | -0.0148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.20 | humidity | 80 | 90 | < th | dose dependent | rect. | 20 | 12 |
| 7 | 57.67 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 5 |
| 8 | 57.78 | humidity | 80 | 90 | < th | dose independent | rect. | 24 | 7 |
| 10 | 57.89 | humidity | 80 | 90 | < th | dose dependent | rect. | 24 | 7 |
| 14 | 58.04 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 15 | 58.08 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 14 |
| 21 | 58.14 | radiation | 20 | 90 | > th | dose independent | rect. | 6 | 1 |
| 36 | 58.14 | radiation | 20 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 59 | 58.17 | humidity | 80 | 90 | < th | dose independent | rect. | 6 | 1 |
| 65 | 58.19 | humidity | 80 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 83 | 58.20 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 144 | 58.20 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 611 | 60.28 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 834 | 64.60 | radiation | 30 | 30 | < th | dose independent | sin | 11 | NA |
| 990 | 67.25 | humidity | 70 | 10 | < th | dose independent | sin | 11 | NA |