Os11g0207100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0207100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.51 | 0.255 | 11.3 | 1.09 | 0.176 | -0.547 | 0.085 | 1.91 | 0.525 | 21.4 | 21.18 | 259 | -- | -- |
| 32.2 | 0.264 | 11.4 | 0.722 | 0.167 | -0.424 | 0.079 | -- | 0.422 | 21.2 | 22.17 | 219 | -- | -- |
| 29.53 | 0.253 | 11.3 | 1.1 | 0.18 | -0.558 | -- | 1.92 | 0.528 | 21.1 | 21.21 | 265 | -- | -- |
| 32.2 | 0.264 | 11.4 | 0.721 | 0.163 | -0.415 | -- | -- | 0.411 | 21.2 | 22.98 | 219 | -- | -- |
| 30.94 | 0.259 | 11.3 | 1.05 | -- | -0.532 | -- | 1.89 | 0.511 | -- | 21.89 | 166 | -- | -- |
| 34.96 | 0.277 | 11.4 | 0.637 | 0.203 | -- | 0.0265 | -- | 0.351 | 1.15 | -- | -- | -- | -- |
| 34.96 | 0.277 | 11.4 | 0.636 | 0.203 | -- | -- | -- | 0.351 | 1.16 | -- | -- | -- | -- |
| 32.67 | 0.267 | 11.4 | 0.703 | -- | -0.479 | -- | -- | 0.372 | -- | 25.9 | 9 | -- | -- |
| 44.4 | 0.31 | 11.4 | -- | 0.132 | -0.308 | -- | -- | 0.276 | 22.8 | 26.17 | 119 | -- | -- |
| 37.5 | 0.286 | 11.4 | 0.644 | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
| 45.63 | 0.316 | 11.4 | -- | 0.213 | -- | -- | -- | 0.28 | 1.28 | -- | -- | -- | -- |
| 45.45 | 0.314 | 11.4 | -- | -- | -0.373 | -- | -- | 0.293 | -- | 26.01 | 9 | -- | -- |
| 48.44 | 0.325 | 11.4 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.86 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 2 | 26.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 9 | 26.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 14 | 26.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 19 | 26.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 38 | 26.59 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 46 | 26.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 87 | 26.87 | temperature | 20 | 270 | > th | dose dependent | sin | 2 | NA |
| 88 | 26.87 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 131 | 27.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 14 |
| 153 | 27.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 12 |
| 230 | 27.28 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 365 | 27.59 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 3 |
| 524 | 27.95 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 12 |
| 564 | 28.03 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 8 |
| 764 | 28.41 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 11 |
| 769 | 28.42 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 781 | 28.42 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 782 | 28.42 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 832 | 28.48 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 858 | 28.50 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 864 | 28.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 873 | 28.52 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 994 | 28.69 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |