Os11g0204800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wali7 protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os11g0204800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Wali7 protein (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.17 | 0.376 | 10.8 | -0.884 | 0.112 | -0.932 | -0.705 | 0.00457 | -0.412 | 12.7 | 4.867 | 1438 | -- | -- |
| 64.15 | 0.373 | 10.8 | -0.887 | 0.104 | -0.951 | -0.708 | -- | -0.415 | 12.8 | 4.686 | 1442 | -- | -- |
| 66.2 | 0.379 | 10.8 | -0.908 | 0.102 | -0.989 | -- | 0.0402 | -0.422 | 13.7 | 4.881 | 1447 | -- | -- |
| 66.2 | 0.379 | 10.8 | -0.917 | 0.0952 | -0.983 | -- | -- | -0.424 | 13.9 | 4.884 | 1447 | -- | -- |
| 66.25 | 0.379 | 10.8 | -0.907 | -- | -1.01 | -- | 0.337 | -0.419 | -- | 5.267 | 1477 | -- | -- |
| 79.94 | 0.419 | 10.7 | -0.743 | 0.0991 | -- | -0.864 | -- | -0.244 | 12.6 | -- | -- | -- | -- |
| 83.14 | 0.427 | 10.7 | -0.776 | 0.102 | -- | -- | -- | -0.248 | 12.9 | -- | -- | -- | -- |
| 66.31 | 0.379 | 10.8 | -0.915 | -- | -1.04 | -- | -- | -0.426 | -- | 4.872 | 1477 | -- | -- |
| 83.82 | 0.426 | 10.7 | -- | 0.00514 | -0.851 | -- | -- | -0.311 | 2.05 | 9.999 | 1510 | -- | -- |
| 83.79 | 0.428 | 10.7 | -0.779 | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
| 98.99 | 0.465 | 10.7 | -- | 0.115 | -- | -- | -- | -0.161 | 13.2 | -- | -- | -- | -- |
| 83.81 | 0.426 | 10.7 | -- | -- | -0.837 | -- | -- | -0.309 | -- | 10 | 1510 | -- | -- |
| 99.81 | 0.466 | 10.7 | -- | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.89 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 3 | 63.04 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 6 | 63.18 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 21 | 63.60 | temperature | 20 | 14400 | < th | dose independent | rect. | 13 | 16 |
| 25 | 63.63 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 30 | 63.65 | temperature | 20 | 14400 | < th | dose independent | sin | 14 | NA |
| 66 | 63.75 | temperature | 20 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 82 | 63.83 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 85 | 63.85 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 222 | 64.28 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 238 | 64.36 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 295 | 64.51 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 324 | 64.58 | temperature | 20 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 326 | 64.59 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 327 | 64.60 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 329 | 64.60 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 20 |
| 332 | 64.60 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 350 | 64.63 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 355 | 64.65 | temperature | 20 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 366 | 64.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 374 | 64.68 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 386 | 64.69 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 426 | 64.76 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 23 |
| 427 | 64.76 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 438 | 64.80 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 449 | 64.82 | temperature | 25 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 450 | 64.83 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 457 | 64.84 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 458 | 64.84 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 459 | 64.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 464 | 64.86 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 501 | 64.95 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 568 | 65.07 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 579 | 65.07 | temperature | 25 | 14400 | < th | dose dependent | rect. | 12 | 14 |
| 607 | 65.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 625 | 65.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 649 | 65.19 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 650 | 65.19 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 690 | 65.24 | temperature | 25 | 14400 | < th | dose dependent | sin | 17 | NA |
| 729 | 65.28 | wind | 1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 790 | 65.33 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 795 | 65.34 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 830 | 65.36 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 847 | 65.38 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 861 | 65.39 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 868 | 65.40 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 920 | 65.44 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 941 | 65.46 | temperature | 10 | 14400 | > th | dose dependent | sin | 16 | NA |
| 950 | 65.46 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 954 | 65.47 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 971 | 65.48 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 980 | 65.49 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |