Os11g0194600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0194600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 249.79 | 0.743 | 3.86 | -4.23 | 0.0464 | 228 | 0.227 | -1330 | -0.15 | 12 | 2 | 1 | 3 | 1 |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 278.25 | 0.782 | 3.14 | 0.0371 | 0.0482 | -- | 0.216 | -- | -0.161 | 8.96 | -- | -- | -- | -- |
| 278.4 | 0.781 | 3.14 | 0.044 | 0.0505 | -- | -- | -- | -0.161 | 7.97 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 278.54 | 0.78 | 3.15 | 0.0445 | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
| 278.46 | 0.781 | 3.15 | -- | 0.0508 | -- | -- | -- | -0.166 | 7.91 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 278.6 | 0.779 | 3.15 | -- | -- | -- | -- | -- | -0.166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 249.79 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 8 | 249.79 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 29 | 254.67 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 30 | 254.74 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 34 | 255.76 | radiation | 1.0 | 270 | < th | dose independent | rect. | 13 | 2 |
| 35 | 255.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 36 | 255.81 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 8 |
| 47 | 257.33 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 6 |
| 59 | 258.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 68 | 259.20 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 70 | 259.31 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 74 | 259.47 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 85 | 260.22 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 91 | 260.40 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 120 | 261.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 124 | 261.40 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 126 | 261.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 148 | 261.75 | humidity | 90.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 150 | 261.75 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 152 | 261.75 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 155 | 261.84 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 180 | 262.03 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 209 | 262.34 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 245 | 262.59 | humidity | 80.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 283 | 262.88 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 1 |
| 336 | 263.21 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 342 | 263.23 | wind | 9.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 363 | 263.40 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 389 | 263.54 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 431 | 263.81 | humidity | 80.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 452 | 263.97 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 509 | 264.30 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 522 | 264.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 534 | 264.43 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 535 | 264.43 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 564 | 264.55 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 565 | 264.56 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 581 | 264.68 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 606 | 264.77 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 615 | 264.81 | wind | 7.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 618 | 264.81 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 620 | 264.82 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 626 | 264.86 | wind | 7.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 628 | 264.86 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 633 | 264.87 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 655 | 264.91 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 671 | 264.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 682 | 265.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 711 | 265.15 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 14 | 19 |
| 729 | 265.20 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 753 | 265.22 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 754 | 265.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 755 | 265.23 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 761 | 265.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 765 | 265.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 766 | 265.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 785 | 265.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 786 | 265.29 | wind | 5.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 797 | 265.31 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 863 | 265.43 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 866 | 265.44 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 881 | 265.46 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 918 | 265.52 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 7 |
| 926 | 265.53 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 943 | 265.55 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 12 | 8 |
| 962 | 265.59 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 976 | 265.61 | wind | 5.0 | 10 | > th | dose dependent | rect. | 19 | 2 |
| 993 | 265.65 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 998 | 265.66 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 1000 | 265.66 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 15 | 5 |