Os11g0184500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0184500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.11 | 0.479 | 3.07 | 0.00309 | 0.111 | 3.13 | 0.0891 | 7.19 | -0.000364 | 7.77 | 1 | 1 | 1 | 1 |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 131.36 | 0.537 | 3.07 | 0.0273 | 0.114 | -- | 0.317 | -- | -0.00838 | 5.55 | -- | -- | -- | -- |
| 131.55 | 0.537 | 3.07 | 0.0293 | 0.121 | -- | -- | -- | -0.00942 | 6.52 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 132.31 | 0.537 | 3.07 | 0.0323 | -- | -- | -- | -- | -0.00693 | -- | -- | -- | -- | -- |
| 131.57 | 0.537 | 3.07 | -- | 0.121 | -- | -- | -- | -0.0127 | 6.51 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 132.34 | 0.537 | 3.07 | -- | -- | -- | -- | -- | -0.0105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.11 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 11 | 104.11 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 27 | 107.07 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 30 | 110.16 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 2 |
| 76 | 120.90 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 4 |
| 90 | 121.60 | wind | 1.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 112 | 122.26 | wind | 1.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 132 | 123.04 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 145 | 123.23 | wind | 1.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 158 | 123.40 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 174 | 123.55 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 188 | 123.66 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 189 | 123.67 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 197 | 123.71 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 198 | 123.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 200 | 123.71 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 201 | 123.71 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 206 | 123.71 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 208 | 123.71 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 213 | 123.71 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 214 | 123.71 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 215 | 123.71 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 220 | 123.71 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 222 | 123.71 | wind | 1.0 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 223 | 123.73 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 235 | 123.82 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 236 | 123.83 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 239 | 123.85 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 245 | 123.93 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 256 | 124.08 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 270 | 124.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 295 | 124.38 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 312 | 124.54 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 325 | 124.77 | wind | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 333 | 124.85 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 334 | 124.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 337 | 124.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 341 | 124.85 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 350 | 124.85 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 351 | 124.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 372 | 124.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 375 | 124.85 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 397 | 124.98 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 403 | 125.11 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 416 | 125.18 | wind | 1.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 428 | 125.28 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 15 |
| 440 | 125.33 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 447 | 125.37 | wind | 1.0 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 470 | 125.44 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 507 | 125.56 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 511 | 125.56 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 520 | 125.58 | wind | 1.0 | 270 | > th | dose independent | sin | 13 | NA |
| 536 | 125.63 | wind | 1.0 | 270 | < th | dose dependent | no | NA | NA |
| 564 | 125.72 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 600 | 125.85 | wind | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 610 | 125.90 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 616 | 125.92 | temperature | 30.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 620 | 125.95 | wind | 1.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 625 | 125.97 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 634 | 126.03 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 701 | 126.26 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 702 | 126.27 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 704 | 126.28 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 713 | 126.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 716 | 126.30 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 720 | 126.30 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 726 | 126.30 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 727 | 126.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 747 | 126.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 750 | 126.31 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 752 | 126.31 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 753 | 126.31 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 755 | 126.32 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 756 | 126.32 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 759 | 126.32 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 760 | 126.32 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 763 | 126.32 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 771 | 126.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 773 | 126.33 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 774 | 126.33 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 777 | 126.33 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 779 | 126.33 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 781 | 126.33 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 786 | 126.33 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 789 | 126.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 790 | 126.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 798 | 126.33 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 803 | 126.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 23 |
| 804 | 126.34 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 807 | 126.35 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 808 | 126.35 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 815 | 126.36 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 816 | 126.36 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 843 | 126.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 865 | 126.49 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 2 |
| 869 | 126.49 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 2 |
| 890 | 126.51 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 14 |
| 922 | 126.57 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 23 |
| 927 | 126.57 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 947 | 126.64 | wind | 1.0 | 270 | < th | dose independent | rect. | 15 | 22 |
| 989 | 126.72 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 22 |