BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0184500 Os11g0184500|Os11g0184500
(96 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33490.2 | chr4:16108781-16110679 REVERSE LENGTH=426 89 4e-19
AT1G77480.1 | chr1:29114705-29117150 REVERSE LENGTH=467 82 5e-17
AT1G44130.1 | chr1:16787508-16789318 REVERSE LENGTH=406 74 1e-14
AT1G49050.1 | chr1:18150638-18153186 FORWARD LENGTH=584 73 2e-14
AT1G31450.1 | chr1:11259872-11261209 REVERSE LENGTH=446 52 7e-08
AT2G35615.1 | chr2:14959391-14960734 FORWARD LENGTH=448 51 1e-07
AT3G18490.1 | chr3:6349090-6350592 REVERSE LENGTH=501 50 2e-07
AT5G36260.1 | chr5:14285068-14288179 REVERSE LENGTH=483 49 7e-07
AT1G25510.1 | chr1:8959372-8960823 REVERSE LENGTH=484 47 3e-06
AT3G59080.1 | chr3:21836812-21838419 FORWARD LENGTH=536 47 3e-06
AT3G25700.1 | chr3:9358937-9360295 FORWARD LENGTH=453 46 3e-06
AT3G02740.1 | chr3:590561-593089 FORWARD LENGTH=489 46 3e-06
AT3G20015.1 | chr3:6978746-6980158 REVERSE LENGTH=471 46 3e-06
AT1G01300.1 | chr1:117065-118522 FORWARD LENGTH=486 46 3e-06
AT3G61820.1 | chr3:22880074-22881525 REVERSE LENGTH=484 46 3e-06
AT1G05840.1 | chr1:1762843-1766150 REVERSE LENGTH=486 46 4e-06
AT2G42980.1 | chr2:17875005-17876588 REVERSE LENGTH=528 45 5e-06
AT5G22850.1 | chr5:7633717-7636298 REVERSE LENGTH=494 45 7e-06
AT5G10770.1 | chr5:3403331-3405331 REVERSE LENGTH=475 45 9e-06
AT5G10760.1 | chr5:3400671-3402165 REVERSE LENGTH=465 45 1e-05
>AT4G33490.2 | chr4:16108781-16110679 REVERSE LENGTH=426
Length = 425
Score = 89.4 bits (220), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 5 RWAPIAGFLIVXXXXXXXXXXXXXXMVFPLHGNVYPSGRFFVTMNIGVPEKPYFLDIDTG 64
RW AGF +VFP+HGNVYP G + VT+NIG P +PY+LD+DTG
Sbjct: 28 RWRKTAGF-------SDRFTRAVSSVVFPVHGNVYPLGYYNVTINIGQPPRPYYLDLDTG 80
Query: 65 SDLTWVECDAPCQSCHQA 82
SDLTW++CDAPC C +A
Sbjct: 81 SDLTWLQCDAPCVRCLEA 98
>AT1G77480.1 | chr1:29114705-29117150 REVERSE LENGTH=467
Length = 466
Score = 82.0 bits (201), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 30 MVFPLHGNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSC 79
+VFP+ GNVYP G ++V +NIG P K + LDIDTGSDLTWV+CDAPC C
Sbjct: 53 VVFPVSGNVYPLGYYYVLLNIGNPPKLFDLDIDTGSDLTWVQCDAPCNGC 102
>AT1G44130.1 | chr1:16787508-16789318 REVERSE LENGTH=406
Length = 405
Score = 73.9 bits (180), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 30 MVFPLHGNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSC 79
+VFPL GNV+P G + V M IG P K + DIDTGSDLTWV+CDAPC C
Sbjct: 35 VVFPLSGNVFPLGYYSVLMQIGSPPKAFQFDIDTGSDLTWVQCDAPCSGC 84
>AT1G49050.1 | chr1:18150638-18153186 FORWARD LENGTH=584
Length = 583
Score = 73.2 bits (178), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 31 VFPLHGNVYPSGRFFVTMNIGVPE--KPYFLDIDTGSDLTWVECDAPCQSC 79
+FP+ GNVYP G ++ + +G PE + Y LDIDTGS+LTW++CDAPC SC
Sbjct: 190 IFPVGGNVYPDGLYYTRILVGKPEDGQYYHLDIDTGSELTWIQCDAPCTSC 240
>AT1G31450.1 | chr1:11259872-11261209 REVERSE LENGTH=446
Length = 445
Score = 51.6 bits (122), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 36 GNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQ 81
G + G +F++++IG P F DTGSDLTWV+C PCQ C++
Sbjct: 77 GLISNGGEYFMSISIGTPPSKVFAIADTGSDLTWVQCK-PCQQCYK 121
>AT2G35615.1 | chr2:14959391-14960734 FORWARD LENGTH=448
Length = 447
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 36 GNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQ 81
G + G FF+++ IG P F DTGSDLTWV+C PCQ C++
Sbjct: 77 GLIGADGEFFMSITIGTPPIKVFAIADTGSDLTWVQCK-PCQQCYK 121
>AT3G18490.1 | chr3:6349090-6350592 REVERSE LENGTH=501
Length = 500
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 41 SGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQ 81
SG +F + +G P K +L +DTGSD+ W++C+ PC C+Q
Sbjct: 159 SGEYFSRIGVGTPAKEMYLVLDTGSDVNWIQCE-PCADCYQ 198
>AT5G36260.1 | chr5:14285068-14288179 REVERSE LENGTH=483
Length = 482
Score = 48.5 bits (114), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 32 FPLHGNVYPS--GRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSC 79
PL G+ G +F + +G P K Y++ +DTGSD+ WV C APC C
Sbjct: 64 LPLGGDSRADSIGLYFTKIKLGSPPKEYYVQVDTGSDILWVNC-APCPKC 112
>AT1G25510.1 | chr1:8959372-8960823 REVERSE LENGTH=484
Length = 483
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 34 LHGNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQ 81
+ G SG +F + IG P + ++ +DTGSD+ W++C PC C+
Sbjct: 138 ISGTTQGSGEYFTRVGIGKPAREVYMVLDTGSDVNWLQC-TPCADCYH 184
>AT3G59080.1 | chr3:21836812-21838419 FORWARD LENGTH=536
Length = 535
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 36 GNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQ 81
G SG +F+ + +G P K + L +DTGSDL W++C PC C Q
Sbjct: 162 GMTLGSGEYFMDVLVGSPPKHFSLILDTGSDLNWIQC-LPCYDCFQ 206
>AT3G25700.1 | chr3:9358937-9360295 FORWARD LENGTH=453
Length = 452
Score = 46.2 bits (108), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 36 GNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQACVALLLTPK 91
G SG++FV + IG P + L DTGSDL WV+C A C++C A + P+
Sbjct: 76 GAASGSGQYFVDLRIGQPPQSLLLIADTGSDLVWVKCSA-CRNCSHHSPATVFFPR 130
>AT3G02740.1 | chr3:590561-593089 FORWARD LENGTH=489
Length = 488
Score = 46.2 bits (108), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 33 PLHGNVYPS--GRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQACVALLLTP 90
PL G+ P G +F + +G P + + + +DTGSD+ WV C A C C + + LTP
Sbjct: 72 PLGGDSQPESIGLYFAKIGLGTPSRDFHVQVDTGSDILWVNC-AGCIRCPRKSDLVELTP 130
>AT3G20015.1 | chr3:6978746-6980158 REVERSE LENGTH=471
Length = 470
Score = 46.2 bits (108), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 41 SGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQ 81
SG +FV + +G P + ++ ID+GSD+ WV+C PC+ C++
Sbjct: 128 SGEYFVRIGVGSPPRDQYMVIDSGSDMVWVQCQ-PCKLCYK 167
>AT1G01300.1 | chr1:117065-118522 FORWARD LENGTH=486
Length = 485
Score = 46.2 bits (108), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 41 SGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCH 80
SG +F + +G P + ++ +DTGSD+ W++C APC+ C+
Sbjct: 139 SGEYFTRLGVGTPARYVYMVLDTGSDIVWLQC-APCRRCY 177
>AT3G61820.1 | chr3:22880074-22881525 REVERSE LENGTH=484
Length = 483
Score = 46.2 bits (108), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 41 SGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQACVALL 87
SG +F+ + +G P ++ +DTGSD+ W++C +PC++C+ A+
Sbjct: 132 SGEYFMRLGVGTPATNVYMVLDTGSDVVWLQC-SPCKACYNQTDAIF 177
>AT1G05840.1 | chr1:1762843-1766150 REVERSE LENGTH=486
Length = 485
Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 32 FPLHGNVYPS--GRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSC 79
PL G P G ++ + IG P K Y++ +DTGSD+ WV C C+ C
Sbjct: 66 LPLGGTGRPDIPGLYYAKIGIGTPAKSYYVQVDTGSDIMWVNC-IQCKQC 114
>AT2G42980.1 | chr2:17875005-17876588 REVERSE LENGTH=528
Length = 527
Score = 45.4 bits (106), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 36 GNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSC-HQ 81
G SG +F+ + +G P K + L +DTGSDL W++C PC C HQ
Sbjct: 152 GMTLGSGEYFMDVLVGTPPKHFSLILDTGSDLNWLQC-LPCYDCFHQ 197
>AT5G22850.1 | chr5:7633717-7636298 REVERSE LENGTH=494
Length = 493
Score = 45.1 bits (105), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 32 FPLHGNVYP--SGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCHQ 81
FP+ G P G ++ + +G P + +++ +DTGSD+ WV C A C C Q
Sbjct: 67 FPVDGTFDPFVVGLYYTKLRLGTPPRDFYVQVDTGSDVLWVSC-ASCNGCPQ 117
>AT5G10770.1 | chr5:3403331-3405331 REVERSE LENGTH=475
Length = 474
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 36 GNVYPSGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCH 80
G+ SG + VT+ +G P+ L DTGSDLTW +C ++C+
Sbjct: 124 GSTLGSGNYIVTVGLGTPKNDLSLIFDTGSDLTWTQCQPCVRTCY 168
>AT5G10760.1 | chr5:3400671-3402165 REVERSE LENGTH=465
Length = 464
Score = 44.7 bits (104), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 41 SGRFFVTMNIGVPEKPYFLDIDTGSDLTWVECDAPCQSCH 80
SG + VT+ IG P+ L DTGSDLTW +C+ SC+
Sbjct: 129 SGNYIVTIGIGTPKHDLSLVFDTGSDLTWTQCEPCLGSCY 168
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.331 0.144 0.508
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,962,963
Number of extensions: 67767
Number of successful extensions: 222
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 221
Number of HSP's successfully gapped: 20
Length of query: 96
Length of database: 11,106,569
Length adjustment: 66
Effective length of query: 30
Effective length of database: 9,297,113
Effective search space: 278913390
Effective search space used: 278913390
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 104 (44.7 bits)