Os11g0183700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SWIRM domain containing protein.
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Os11g0183700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SWIRM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.58 | 0.191 | 10.5 | 0.507 | 0.251 | 0.447 | -0.479 | 0.127 | -0.0373 | 8.23 | 27.26 | 103 | -- | -- |
| 16.6 | 0.19 | 10.5 | 0.529 | 0.25 | 0.443 | -0.48 | -- | -0.0319 | 8.28 | 27.34 | 107 | -- | -- |
| 17.27 | 0.194 | 10.5 | 0.489 | 0.258 | 0.443 | -- | 0.168 | -0.0395 | 8.26 | 27.03 | 96 | -- | -- |
| 17.33 | 0.194 | 10.5 | 0.517 | 0.251 | 0.447 | -- | -- | -0.0319 | 8.25 | 27.14 | 110 | -- | -- |
| 19.99 | 0.208 | 10.5 | 0.538 | -- | 0.511 | -- | -0.00106 | -0.0139 | -- | 27.92 | 287 | -- | -- |
| 19.54 | 0.207 | 10.6 | 0.412 | 0.296 | -- | -0.465 | -- | -0.129 | 6.92 | -- | -- | -- | -- |
| 20.08 | 0.21 | 10.6 | 0.403 | 0.296 | -- | -- | -- | -0.128 | 6.67 | -- | -- | -- | -- |
| 19.99 | 0.208 | 10.5 | 0.537 | -- | 0.512 | -- | -- | -0.0143 | -- | 27.91 | 287 | -- | -- |
| 23.55 | 0.226 | 10.6 | -- | 0.28 | 0.227 | -- | -- | -0.13 | 7.21 | 26.12 | 84 | -- | -- |
| 24.65 | 0.232 | 10.6 | 0.41 | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
| 24.36 | 0.231 | 10.6 | -- | 0.301 | -- | -- | -- | -0.173 | 6.59 | -- | -- | -- | -- |
| 26.95 | 0.242 | 10.6 | -- | -- | 0.33 | -- | -- | -0.108 | -- | 28.4 | 279 | -- | -- |
| 29.08 | 0.252 | 10.6 | -- | -- | -- | -- | -- | -0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.39 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 2 | 14.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 16 | 14.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 35 | 15.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 70 | 15.26 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 14 | 18 |
| 124 | 15.49 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 159 | 15.58 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 207 | 15.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 13 |
| 238 | 15.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 244 | 15.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 256 | 15.80 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 259 | 15.81 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 265 | 15.82 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 280 | 15.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 289 | 15.86 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 304 | 15.88 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 340 | 15.92 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 341 | 15.92 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 362 | 15.96 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 370 | 15.97 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 404 | 16.01 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 413 | 16.02 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 430 | 16.04 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 440 | 16.05 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 453 | 16.06 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 24 | 15 |
| 458 | 16.07 | temperature | 10.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 463 | 16.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 466 | 16.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 467 | 16.08 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 469 | 16.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 473 | 16.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 482 | 16.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 483 | 16.09 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 485 | 16.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 487 | 16.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 488 | 16.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 491 | 16.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 492 | 16.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 493 | 16.09 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 515 | 16.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 532 | 16.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 535 | 16.13 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 537 | 16.13 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 542 | 16.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 546 | 16.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 564 | 16.16 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 570 | 16.17 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 580 | 16.18 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 603 | 16.19 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 614 | 16.20 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 619 | 16.21 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 621 | 16.21 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 626 | 16.21 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 632 | 16.22 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 654 | 16.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 655 | 16.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 657 | 16.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 658 | 16.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 661 | 16.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 662 | 16.24 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 664 | 16.24 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 668 | 16.24 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 670 | 16.24 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 674 | 16.24 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 682 | 16.24 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 708 | 16.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 713 | 16.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 715 | 16.27 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 729 | 16.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 734 | 16.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 741 | 16.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 747 | 16.29 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 770 | 16.31 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 784 | 16.31 | temperature | 30.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 787 | 16.31 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 803 | 16.32 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 807 | 16.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 808 | 16.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 822 | 16.33 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 840 | 16.34 | temperature | 30.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 855 | 16.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 888 | 16.36 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 14 | 19 |
| 894 | 16.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 909 | 16.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 940 | 16.38 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 21 |
| 983 | 16.40 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 994 | 16.40 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 11 | 17 |