BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0183700 Os11g0183700|AK066941
(784 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21700.1 | chr1:7620156-7623978 REVERSE LENGTH=808 582 e-166
AT2G33610.1 | chr2:14229023-14231149 FORWARD LENGTH=470 140 2e-33
AT4G34430.4 | chr4:16461069-16464993 FORWARD LENGTH=987 130 2e-30
AT2G47620.1 | chr2:19532034-19534251 FORWARD LENGTH=513 92 7e-19
AT3G07740.4 | chr3:2470014-2473062 REVERSE LENGTH=556 59 1e-08
AT4G16420.1 | chr4:9262805-9265775 REVERSE LENGTH=488 59 1e-08
>AT1G21700.1 | chr1:7620156-7623978 REVERSE LENGTH=808
Length = 807
Score = 582 bits (1501), Expect = e-166, Method: Compositional matrix adjust.
Identities = 329/726 (45%), Positives = 421/726 (57%), Gaps = 64/726 (8%)
Query: 72 DPVLDLREAEVLPSAEPVSAFPVATRRVVNRPHPSVLAVIAAERXXXXXXXXXXXXXXPV 131
DP L + E V S +S FP +RVV RPH SV+AV+AAER P
Sbjct: 65 DPGLGIGEV-VEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRGQGSL-PA 122
Query: 132 LENISYGQQQVLSGVLPDHASLATDTDKPSTYVCTPPNLMEGHGVTKQFQGRLHVVPKHS 191
LENIS+GQ Q LS V D L S YV +PP +M+G GV K+F +HV+P HS
Sbjct: 123 LENISFGQLQALSTVPADSLDLERSDGSSSAYVISPPPIMDGEGVVKRFGDLVHVLPMHS 182
Query: 192 DWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSKRLAFAECQGLV 251
DWF+P V RLERQVVPQFFSGKSP +TPE YM RN +++KY+ENP K L ++CQGLV
Sbjct: 183 DWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLV 242
Query: 252 ANTAELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSLLREEPTGELQLLTAPLKSID 311
+ ++ D +R+ RFLD WGIINY A+ H G S +RE+ GE+ + +A L SID
Sbjct: 243 -DGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSID 301
Query: 312 GLILFDRPKCNLQAEDI-SSLASNSEVVDFDAGLAELDGKIRERLSESSCSYCLQPLTSL 370
LI FD+P C + ++ SSL S D +LD +IRE L +S C++C +PL ++
Sbjct: 302 SLIKFDKPNCRHKGGEVYSSLPS------LDGDSPDLDIRIREHLCDSHCNHCSRPLPTV 355
Query: 371 HYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDSWTDQETLLLLEGI 430
++QS K+ DI LC DCFH R++ GHS LDF R+D + DGD+WTDQETLLLLE +
Sbjct: 356 YFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAV 415
Query: 431 EKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPDASVPFRAETNGYPH--L 488
E YN+NW IA+HVG+KSKAQCI HF+RLPVEDGLL+N+EV + TNGY H
Sbjct: 416 ELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNT-ENPTNGYDHKGT 474
Query: 489 DCNGSTSGNLPQKIPPDNQLPFINSSNPVMSLVGFLASAMGPRXXXXXXXXXXXXXTVDD 548
D NG G Q + +LPF+ S NPVM+LV FLASA+GPR + DD
Sbjct: 475 DSNGDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDD 534
Query: 549 DSRVNSEGI---------CSDSRGQGPHPNFRDHNGGVSSSISPEKVKHAAMCGLSAAAT 599
R+ SEG+ + + G H + + + +KV A GLSAAAT
Sbjct: 535 --RMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFRAGLSAAAT 592
Query: 600 KAKLFADQEEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDR 659
KAKLFAD EEREIQRL+A ++NHQLKR+ELKLKQFAE+ETLL+KECEQVE+ RQR +++R
Sbjct: 593 KAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAER 652
Query: 660 VRIVSTRLASPG------------------NSLXXXXXXXXXXXXXXXXXXXXXVPGSMP 701
R++S R SPG N++ +PG
Sbjct: 653 ARMLSARFGSPGGISPQTNNLQGMSLSTGGNNINSLMHQQHQQQQASATSQPSIIPG--- 709
Query: 702 QSSMPAPFANNMQGHGHPQMAFLX---------XXXXXXMLSFGPRLPLSAIQTQPSPQT 752
F+NN Q QM F+ SFGPRLPL+AIQT
Sbjct: 710 -------FSNNPQVQA--QMHFMARQQQQQQQQQQQQQQAFSFGPRLPLNAIQTNAGSTA 760
Query: 753 S-NIMF 757
S N+MF
Sbjct: 761 SPNVMF 766
>AT2G33610.1 | chr2:14229023-14231149 FORWARD LENGTH=470
Length = 469
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 222/489 (45%), Gaps = 98/489 (20%)
Query: 187 VPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSKRLAFAE 246
VP +S WFS ++ E + +P+FF +S P+ Y+ LRN +I +Y ++ ++++F +
Sbjct: 50 VPSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTD 109
Query: 247 CQGLVANTAELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSLLREEPTGELQLLTAP 306
+ + +++ + R+ FLD+WG+INY +S S P
Sbjct: 110 VRRTL--VSDVVSIRRVFDFLDSWGLINYNSSASAK-----------------------P 144
Query: 307 LKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRERLSESSCSYCLQP 366
LK ++ + A D +S + + ++E ++ +C+ C +
Sbjct: 145 LK-------WEEKEAGKSAGDAASEPATT---------------VKE-TAKRNCNGC-KA 180
Query: 367 LTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDSWTDQETLLL 426
+ S+ + + D+ LC+ C+ + Y G +S +F+R++ SE W+D+E LLL
Sbjct: 181 ICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEI----SEESKPEWSDKEILLL 236
Query: 427 LEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPV----------EDGLLENIEVPDASV 476
LE + Y D+W +A HV +++ C+ F++LP EDGL ++ D+ +
Sbjct: 237 LEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSEDGLEMFDQIKDSDI 296
Query: 477 PFRAETNGYPHLDCNGSTSGNLPQKIPPDNQL---PFINSSNPVMSLVGFLASAMGPRXX 533
P E+ G +D +GS+ P+ ++ P ++SNP+M+ FL++ G
Sbjct: 297 P---ESEG---IDKDGSS---------PNKRIKLTPLADASNPIMAQAAFLSALAGTNVA 341
Query: 534 XXXXXXXXXXXTVDDDSRVNSEGICSDSRGQGPHPNFRDHNGGVSSSISPEKVKHAAMCG 593
S V+ E + SR PN +D N S + + +
Sbjct: 342 EAAARAAVRAL-----SDVDYEADKNASRD----PNRQDANAASSGETTRNESER----- 387
Query: 594 LSAAATKAKLFADQEEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQ 653
A AK ++EE E++ + ++K++ ++ F +++ + + +Q+E +R
Sbjct: 388 ---AWADAKSLIEKEEHEVEGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRN 444
Query: 654 RIASDRVRI 662
+ D++ I
Sbjct: 445 LLFVDQLNI 453
>AT4G34430.4 | chr4:16461069-16464993 FORWARD LENGTH=987
Length = 986
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 149/298 (50%), Gaps = 27/298 (9%)
Query: 184 LHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSKRLA 243
+HVVP H WFS +H LE + +P FF+GK G T E Y +RN ++ K+ NP+ ++
Sbjct: 144 VHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIE 203
Query: 244 FAECQGLVANTAELYDLSRIVRFLDTWGIINYL--------ASGSVHRGLRMATSLLREE 295
+ L +E ++ FLD WG+IN+ ++ S H L SLL
Sbjct: 204 LKDLTELEVGDSEAK--QEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSL 261
Query: 296 PTGELQLLTAPLKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRERL 355
++ P L +P+ QA S L + D L + +G
Sbjct: 262 YRFQVDEACPP--------LVHKPRFTAQAT-PSGLFPDPMAAD---ELLKQEGPA---- 305
Query: 356 SESSCSYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDG 415
E C+ C + Y K+AD LC++CF+ ++ + SS DF ++ G
Sbjct: 306 VEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSG 365
Query: 416 DSWTDQETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPD 473
WTDQETLLLLE +E + +NWN IAEHV TK+KAQC+ HF+++P+ED L+ I+ D
Sbjct: 366 -KWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD 422
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 565 GPHPNF-----RDHNGGVSSSISPEKVKHAAMCGLSAAATKAKLFADQEEREIQRLTATV 619
G +PN +D G + EK+K AA+ +SAAA KAK A QEE +I++L+ ++
Sbjct: 805 GGNPNIEGKKEKDICEGTKDKYNIEKLKRAAISAISAAAVKAKNLAKQEEDQIRQLSGSL 864
Query: 620 I-NHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRVRIVSTRLASP 670
I QL +LE KL F E E+L ++ EQ+ER RQR+ +R +I++ RL P
Sbjct: 865 IEKQQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERAQIIAARLGVP 916
>AT2G47620.1 | chr2:19532034-19534251 FORWARD LENGTH=513
Length = 512
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 26/287 (9%)
Query: 184 LHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSKRLA 243
L+ +P S WF +H +ER+ +FF+ S TP+ Y R+ +I K+ E+ +RL
Sbjct: 12 LYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLT 71
Query: 244 FAECQGLVANTAELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSLLREEPTGELQLL 303
F + + L L ++ FL+ WG+IN+ +S + L + E+ T +
Sbjct: 72 FTSVRKFLVGDVNL--LQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRV 129
Query: 304 TAPLKSIDGL----ILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRERLSESS 359
TA S+ + ++ +R + ++ + L S S+V + L + D +
Sbjct: 130 TATPNSLRPITAPPLVEERVETGIK---VPPLTSYSDVF---SDLKKPDHVL-------V 176
Query: 360 CSYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDSWT 419
C++C + S YQ K + +C CF + Y +++ DF+ I + WT
Sbjct: 177 CAHCGERCDSPFYQHNK-GIVNICEKCFKNGNYGENNTADDFKLI------GNSAAAVWT 229
Query: 420 DQETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLL 466
++E LLLLE + K+ D+W I++ V TKS+ CI I LP + L+
Sbjct: 230 EEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLM 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 47/68 (69%)
Query: 602 KLFADQEEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRVR 661
K+ ADQEERE+++L ATVI QLK+L+ KLK ++E+++ +E + +E +++ I +RV
Sbjct: 433 KILADQEEREMEQLAATVIEQQLKKLQSKLKFLDDLESIMDEEEKVIEGVKETIIQERVS 492
Query: 662 IVSTRLAS 669
++ S
Sbjct: 493 VLQCAFRS 500
>AT3G07740.4 | chr3:2470014-2473062 REVERSE LENGTH=556
Length = 555
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 360 CSYCLQPLTSL-HYQSLKEADIALCSDCFHDARYITGHSS-------LDFQRIDGDNDRS 411
C+YC + L+ L ++ D LC +CF + H + + FQR DN
Sbjct: 53 CNYCDKDLSGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYRVMVSFQR-RADNLSF 111
Query: 412 ENDGDSWTDQETLLLLEGIEKYN-DNWNNIAEHVGTKSKAQCIYHF 456
W E +LLLE I Y NW +A+HVG+K+ +CI HF
Sbjct: 112 SLVTSDWNADEEILLLEAIATYGFGNWKEVADHVGSKTTTECIKHF 157
>AT4G16420.1 | chr4:9262805-9265775 REVERSE LENGTH=488
Length = 487
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 359 SCSYCLQPLT-SLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDS 417
+C YC + +T + + D LC +C IT H R+ G+ D
Sbjct: 46 NCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHPYRVMGNLTFPLICPD- 104
Query: 418 WTDQETLLLLEGIEKYN-DNWNNIAEHVGTKSKAQCIYHF 456
W+ + +LLLEG+E Y NW +AEHVGTKSK QC+ H+
Sbjct: 105 WSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQCLEHY 144
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,588,478
Number of extensions: 627276
Number of successful extensions: 1802
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1787
Number of HSP's successfully gapped: 9
Length of query: 784
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 678
Effective length of database: 8,200,473
Effective search space: 5559920694
Effective search space used: 5559920694
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)