Os11g0182100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0182100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 173.44 | 0.619 | 10.6 | 1.37 | 2.2 | 2.45 | -2.79 | -4.66 | -0.347 | 18.5 | 26.29 | 723 | 7.76 | -- |
| 192.11 | 0.646 | 10.6 | 1.01 | 1.52 | 1.94 | 0.584 | -- | -0.372 | 17.8 | 26.08 | 700 | 9.44 | -- |
| 179.48 | 0.624 | 10.6 | 1.25 | 1.78 | 2.09 | -- | -2.39 | -0.424 | 18.3 | 26.2 | 742 | 8.99 | -- |
| 191.74 | 0.645 | 10.6 | 1.06 | 1.68 | 2.05 | -- | -- | -0.414 | 18.3 | 26.29 | 744 | 9.06 | -- |
| 242 | 0.728 | 10.6 | 0.822 | -- | 0.892 | -- | -1.24 | -0.526 | -- | 25.5 | 1837 | 9.04 | -- |
| 250.94 | 0.743 | 10.7 | 0.517 | 0.741 | -- | -1.07 | -- | -0.806 | 21.1 | -- | -- | -- | -- |
| 253.82 | 0.746 | 10.7 | 0.56 | 0.771 | -- | -- | -- | -0.801 | 20.4 | -- | -- | -- | -- |
| 229.91 | 0.706 | 10.6 | 0.882 | -- | 1.36 | -- | -- | -0.786 | -- | 29.3 | 3105 | 8.85 | -- |
| 211.87 | 0.678 | 10.6 | -- | 1.41 | 1.69 | -- | -- | -0.569 | 18.3 | 26.29 | 746 | 9.31 | -- |
| 286.92 | 0.791 | 10.6 | 0.556 | -- | -- | -- | -- | -0.809 | -- | -- | -- | -- | -- |
| 262.09 | 0.757 | 10.7 | -- | 0.769 | -- | -- | -- | -0.863 | 20.4 | -- | -- | -- | -- |
| 246.9 | 0.732 | 10.7 | -- | -- | 1.26 | -- | -- | -0.931 | -- | 29.4 | 3204 | 10.3 | -- |
| 295.07 | 0.802 | 10.7 | -- | -- | -- | -- | -- | -0.871 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 46 | 184.46 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 6 |
| 48 | 185.04 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 1 |
| 63 | 187.32 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 7 |
| 89 | 191.10 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 143 | 195.26 | temperature | 25 | 720 | < th | dose independent | sin | 15 | NA |
| 165 | 196.52 | temperature | 25 | 720 | > th | dose independent | sin | 15 | NA |
| 191 | 197.77 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 3 |
| 215 | 198.82 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 270 | 200.89 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 1 |
| 323 | 202.34 | radiation | 20 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 344 | 202.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 373 | 203.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 420 | 204.36 | temperature | 25 | 720 | < th | dose independent | rect. | 23 | 1 |
| 421 | 204.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 430 | 204.50 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 517 | 206.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 527 | 206.71 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 544 | 206.95 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 564 | 207.20 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 583 | 207.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 10 |
| 587 | 207.49 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 591 | 207.52 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 677 | 208.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 685 | 208.68 | radiation | 40 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 844 | 209.76 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 873 | 209.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 896 | 210.14 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 919 | 210.23 | radiation | 1 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 932 | 210.31 | radiation | 10 | 720 | < th | dose independent | rect. | 16 | 1 |
| 947 | 210.31 | radiation | 40 | 1440 | < th | dose dependent | rect. | 18 | 3 |