Os11g0175500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os11g0175500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.18 | 0.431 | 7.01 | 1.39 | 2.06 | 1.05 | 1.73 | -1.05 | 0.429 | 18.5 | 80 | 1361 | -- | -- |
| 85.15 | 0.43 | 7.02 | 1.31 | 2.06 | 0.995 | 1.69 | -- | 0.411 | 18.5 | 80.29 | 1353 | -- | -- |
| 91.6 | 0.446 | 7.01 | 1.36 | 2.07 | 1.07 | -- | -0.881 | 0.433 | 18.5 | 80 | 1375 | -- | -- |
| 92.27 | 0.447 | 7.02 | 1.28 | 2.06 | 1.02 | -- | -- | 0.418 | 18.5 | 80.15 | 1364 | -- | -- |
| 311.5 | 0.822 | 7 | 1.27 | -- | 1.41 | -- | -0.656 | 0.369 | -- | 81 | 1341 | -- | -- |
| 97.84 | 0.464 | 7.03 | 1.29 | 2.11 | -- | 1.76 | -- | 0.35 | 18.4 | -- | -- | -- | -- |
| 105.59 | 0.481 | 7.03 | 1.26 | 2.12 | -- | -- | -- | 0.356 | 18.5 | -- | -- | -- | -- |
| 311.73 | 0.822 | 6.99 | 1.19 | -- | 1.42 | -- | -- | 0.381 | -- | 81 | 1343 | -- | -- |
| 137.12 | 0.545 | 7.01 | -- | 2.02 | 1.04 | -- | -- | 0.405 | 18.5 | 80 | 1375 | -- | -- |
| 338.32 | 0.859 | 6.99 | 1.21 | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
| 147.63 | 0.568 | 7.06 | -- | 2.1 | -- | -- | -- | 0.215 | 18.5 | -- | -- | -- | -- |
| 349.38 | 0.871 | 7 | -- | -- | 1.34 | -- | -- | 0.265 | -- | 84 | 1339 | -- | -- |
| 376.9 | 0.906 | 7.02 | -- | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.95 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 20 |
| 6 | 82.32 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 11 | 82.71 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 46 | 83.65 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 47 | 83.65 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 55 | 83.67 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 73 | 83.73 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 74 | 83.75 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 8 |
| 76 | 83.77 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 90 | 83.82 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 109 | 83.88 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 110 | 83.88 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 111 | 83.88 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 133 | 84.02 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 138 | 84.06 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 167 | 84.17 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 248 | 84.41 | radiation | 10.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 286 | 84.46 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 344 | 84.61 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 359 | 84.63 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 13 |
| 382 | 84.67 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 415 | 84.76 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 459 | 84.85 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 467 | 84.88 | humidity | 80.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 469 | 84.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 471 | 84.90 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 473 | 84.90 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 477 | 84.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 481 | 84.92 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 510 | 84.97 | humidity | 80.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 537 | 85.01 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 559 | 85.05 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 584 | 85.08 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 586 | 85.09 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 598 | 85.12 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 16 |
| 609 | 85.14 | humidity | 70.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 612 | 85.15 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 623 | 85.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 632 | 85.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 633 | 85.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 634 | 85.17 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 674 | 85.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 679 | 85.22 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 681 | 85.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 706 | 85.25 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 20 | 20 |
| 737 | 85.30 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 742 | 85.30 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 779 | 85.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 784 | 85.36 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |
| 901 | 85.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 903 | 85.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 966 | 85.50 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 981 | 85.52 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 19 |