Os11g0171400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0171400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.7 | 0.314 | 9.61 | 0.972 | 1.25 | 0.251 | -0.774 | 2.61 | 0.168 | 4.77 | 18.7 | 1331 | -- | -- |
| 48.18 | 0.323 | 9.69 | 0.267 | 1.57 | 0.611 | -0.222 | -- | -0.0112 | 4.88 | 25.29 | 429 | -- | -- |
| 45.99 | 0.316 | 9.6 | 0.982 | 1.27 | 0.242 | -- | 2.63 | 0.176 | 4.77 | 18.58 | 1628 | -- | -- |
| 48.2 | 0.323 | 9.68 | 0.273 | 1.56 | 0.65 | -- | -- | 0.0169 | 4.95 | 25.63 | 430 | -- | -- |
| 126.4 | 0.526 | 9.62 | 0.937 | -- | -0.782 | -- | 2.21 | 0.302 | -- | 18.7 | 2699 | -- | -- |
| 54.9 | 0.347 | 9.68 | 0.378 | 1.28 | -- | -0.561 | -- | 0.0495 | 4.73 | -- | -- | -- | -- |
| 55.72 | 0.35 | 9.68 | 0.381 | 1.28 | -- | -- | -- | 0.0524 | 4.75 | -- | -- | -- | -- |
| 129.15 | 0.532 | 9.67 | 0.534 | -- | -0.713 | -- | -- | 0.164 | -- | 24.06 | 1241 | -- | -- |
| 50.06 | 0.33 | 9.69 | -- | 1.59 | 0.704 | -- | -- | -0.014 | 5 | 25.47 | 436 | -- | -- |
| 141.99 | 0.557 | 9.69 | 0.429 | -- | -- | -- | -- | 0.0856 | -- | -- | -- | -- | -- |
| 59.54 | 0.361 | 9.69 | -- | 1.28 | -- | -- | -- | 0.00997 | 4.74 | -- | -- | -- | -- |
| 130.67 | 0.532 | 9.72 | -- | -- | 0.646 | -- | -- | -0.0401 | -- | 24.1 | 1244 | -- | -- |
| 146.84 | 0.566 | 9.7 | -- | -- | -- | -- | -- | 0.038 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 19 |
| 4 | 43.65 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 7 | 43.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 11 |
| 13 | 44.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 20 | 44.13 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 25 | 44.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 31 | 44.30 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 53 | 44.59 | wind | 7 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 56 | 44.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 66 | 44.69 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 20 | 16 |
| 78 | 44.74 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 97 | 44.79 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 102 | 44.82 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 106 | 44.83 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 113 | 44.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 135 | 44.90 | wind | 7 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 141 | 44.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 12 |
| 149 | 44.92 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 19 | 17 |
| 151 | 44.92 | atmosphere | 1005 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 155 | 44.93 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 21 | 15 |
| 160 | 44.94 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 169 | 44.95 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 7 | NA |
| 170 | 44.95 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 5 | NA |
| 174 | 44.95 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 207 | 44.98 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 222 | 44.99 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 256 | 45.02 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 259 | 45.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 21 |
| 300 | 45.05 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 18 |
| 334 | 45.08 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 7 | NA |
| 336 | 45.08 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 345 | 45.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 22 |
| 381 | 45.10 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 391 | 45.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 449 | 45.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 526 | 45.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 573 | 45.21 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 593 | 45.22 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 18 |
| 594 | 45.22 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 21 |
| 599 | 45.22 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 600 | 45.22 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 612 | 45.23 | atmosphere | 1005 | 14400 | < th | dose independent | no | NA | NA |
| 768 | 45.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 930 | 45.38 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 947 | 45.39 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 13 |