Os11g0169900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment).
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Os11g0169900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.37 | 0.136 | 13.1 | 0.224 | 0.204 | -0.166 | -0.197 | 0.0256 | 0.188 | 12.3 | 17.3 | 9 | -- | -- |
| 8.38 | 0.135 | 13.1 | 0.224 | 0.206 | -0.168 | -0.176 | -- | 0.188 | 12.3 | 17.3 | 8 | -- | -- |
| 8.46 | 0.135 | 13.1 | 0.237 | 0.205 | -0.17 | -- | -0.0873 | 0.183 | 12.5 | 17.5 | 9 | -- | -- |
| 8.5 | 0.136 | 13.1 | 0.221 | 0.211 | -0.171 | -- | -- | 0.187 | 12.5 | 17.09 | 8 | -- | -- |
| 9.64 | 0.145 | 13.1 | 0.21 | -- | -0.0356 | -- | -0.076 | 0.189 | -- | 17.5 | 9 | -- | -- |
| 9.31 | 0.143 | 13.1 | 0.217 | 0.0432 | -- | -0.31 | -- | 0.191 | 9.84 | -- | -- | -- | -- |
| 9.57 | 0.145 | 13.1 | 0.207 | 0.0604 | -- | -- | -- | 0.191 | 13 | -- | -- | -- | -- |
| 9.67 | 0.145 | 13.1 | 0.21 | -- | -0.0397 | -- | -- | 0.192 | -- | 20.77 | 6 | -- | -- |
| 9.75 | 0.145 | 13.1 | -- | 0.197 | -0.16 | -- | -- | 0.163 | 12.4 | 17.3 | 8 | -- | -- |
| 9.8 | 0.146 | 13.1 | 0.205 | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
| 10.7 | 0.153 | 13.1 | -- | 0.0571 | -- | -- | -- | 0.168 | 12.8 | -- | -- | -- | -- |
| 10.76 | 0.153 | 13.1 | -- | -- | -0.133 | -- | -- | 0.167 | -- | 60 | 8 | -- | -- |
| 10.9 | 0.154 | 13.1 | -- | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.88 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 8 | 8.05 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 11 | 8.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 12 | 8.09 | wind | 3.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 17 | 8.10 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 19 | 8.10 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 22 | 8.11 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 23 | 8.11 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 26 | 8.12 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 28 | 8.13 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 11 |
| 39 | 8.14 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 9 |
| 40 | 8.14 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 50 | 8.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 58 | 8.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 10 |
| 59 | 8.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 14 |
| 62 | 8.16 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 64 | 8.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 10 |
| 67 | 8.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 72 | 8.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 75 | 8.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 76 | 8.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 77 | 8.17 | wind | 7.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 91 | 8.18 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 100 | 8.19 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 110 | 8.19 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 119 | 8.19 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 122 | 8.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 123 | 8.20 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 130 | 8.20 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 137 | 8.21 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 139 | 8.21 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 13 | 10 |
| 144 | 8.21 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 146 | 8.21 | radiation | 20.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 147 | 8.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 151 | 8.21 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 154 | 8.21 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 166 | 8.22 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 16 |
| 173 | 8.22 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 10 |
| 177 | 8.22 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 199 | 8.23 | temperature | 30.0 | 10 | < th | dose dependent | sin | 13 | NA |
| 215 | 8.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 219 | 8.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 233 | 8.24 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 236 | 8.24 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 242 | 8.24 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 16 |
| 261 | 8.25 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 262 | 8.25 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 9 |
| 276 | 8.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 283 | 8.26 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 301 | 8.27 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 314 | 8.27 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 5 |
| 343 | 8.28 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 344 | 8.28 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 348 | 8.28 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 362 | 8.28 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 370 | 8.28 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 18 | 10 |
| 383 | 8.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 385 | 8.29 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 390 | 8.29 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 9 |
| 401 | 8.29 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 19 |
| 405 | 8.29 | temperature | 10.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 406 | 8.29 | temperature | 10.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 418 | 8.29 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 9 |
| 422 | 8.29 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 13 | 10 |
| 427 | 8.29 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 435 | 8.30 | wind | 9.0 | 1440 | < th | dose independent | rect. | 24 | 3 |
| 456 | 8.30 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 468 | 8.30 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 514 | 8.31 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 528 | 8.31 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 541 | 8.31 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 564 | 8.32 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 568 | 8.32 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 9 |
| 573 | 8.32 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 574 | 8.32 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 575 | 8.32 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 576 | 8.32 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 621 | 8.32 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 625 | 8.33 | radiation | 10.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 628 | 8.33 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 633 | 8.33 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 9 |
| 659 | 8.33 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 670 | 8.33 | radiation | 40.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 678 | 8.33 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 713 | 8.34 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 741 | 8.34 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 759 | 8.34 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 4 | 19 |
| 763 | 8.34 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 21 |
| 814 | 8.34 | wind | 9.0 | 30 | < th | dose dependent | rect. | 10 | 16 |
| 827 | 8.35 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 831 | 8.35 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 839 | 8.35 | humidity | 90.0 | 10 | < th | dose independent | rect. | 14 | 9 |
| 875 | 8.35 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 917 | 8.36 | radiation | 20.0 | 10 | < th | dose independent | sin | 23 | NA |
| 919 | 8.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 920 | 8.36 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 923 | 8.36 | wind | 9.0 | 1440 | < th | dose independent | rect. | 22 | 5 |
| 926 | 8.36 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 945 | 8.36 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 15 |
| 951 | 8.36 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 972 | 8.36 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 6 |