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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0169400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, C2H2-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.53 (0.0257) R2 : 0.00307
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.064 (0.054) R2dN8 : 0.00396 R2N8 : 0.00307
σ : 0.483
deviance : 107.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.78 0.448 3.56 -0.412 0.234 0.55 -0.938 -0.632 -0.225 6.22 1004 10 -- --
91.26 0.448 3.56 -0.425 0.232 0.57 -0.983 -- -0.222 6.29 1004 6 -- --
92.76 0.452 3.55 -0.422 0.234 0.553 -- -0.748 -0.223 5.67 1004 10 -- --
93.57 0.453 3.56 -0.437 0.23 0.573 -- -- -0.216 5.7 1005 2 -- --
95.55 0.458 3.56 -0.414 -- 0.601 -- -0.716 -0.225 -- 1004 10 -- --
96.08 0.46 3.53 -0.439 0.265 -- -0.964 -- -0.122 6.41 -- -- -- --
98.31 0.464 3.53 -0.453 0.264 -- -- -- -0.119 5.89 -- -- -- --
96.29 0.459 3.56 -0.429 -- 0.615 -- -- -0.221 -- 1005 3 -- --
98.58 0.465 3.55 -- 0.223 0.599 -- -- -0.171 5.77 1005 2 -- --
101.93 0.472 3.54 -0.445 -- -- -- -- -0.113 -- -- -- -- --
103.71 0.476 3.52 -- 0.258 -- -- -- -0.069 5.97 -- -- -- --
101.12 0.468 3.55 -- -- 0.642 -- -- -0.175 -- 1005 2 -- --
107.15 0.483 3.53 -- -- -- -- -- -0.064 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 84.64 radiation 1.0 43200 < th dose dependent rect. 3 1
3 86.83 atmosphere 995.0 30 > th dose independent rect. 3 23
8 87.02 radiation 1.0 4320 < th dose dependent rect. 3 1
11 87.05 wind 9.0 1440 < th dose independent rect. 3 1
12 87.05 temperature 10.0 1440 > th dose independent rect. 3 1
15 87.05 temperature 30.0 1440 < th dose independent rect. 3 1
19 87.05 humidity 50.0 1440 > th dose independent rect. 3 1
28 87.05 atmosphere 995.0 1440 > th dose independent rect. 3 1
29 87.05 radiation 1.0 1440 < th dose independent rect. 3 1
49 87.05 temperature 10.0 1440 > th dose independent rect. 4 23
63 87.31 temperature 20.0 30 > th dose independent rect. 2 1
64 87.33 atmosphere 1005.0 30 > th dose independent rect. 2 1
65 87.35 temperature 20.0 30 > th dose dependent rect. 2 1
66 87.35 atmosphere 1005.0 30 > th dose dependent rect. 2 1
70 87.40 wind 3.0 30 < th dose independent rect. 2 1
71 87.40 humidity 80.0 30 > th dose independent rect. 2 1
74 87.41 wind 5.0 30 < th dose dependent rect. 2 1
84 87.48 humidity 60.0 30 > th dose dependent rect. 2 1
90 87.50 temperature 10.0 30 > th dose independent rect. 2 1
92 87.50 temperature 30.0 30 < th dose independent rect. 2 1
93 87.50 humidity 50.0 30 > th dose independent rect. 2 1
97 87.50 atmosphere 1010.0 30 < th dose independent rect. 2 1
99 87.50 radiation 1.0 30 < th dose independent rect. 2 1
104 87.50 precipitation 0.1 30 < th dose independent rect. 2 1
105 87.50 temperature 10.0 30 > th dose independent rect. 3 23
106 87.50 radiation 1.0 30 < th dose dependent rect. 2 1
111 87.50 precipitation 0.1 30 < th dose dependent rect. 2 1
116 87.56 humidity 50.0 10 > th dose independent rect. 3 23
121 87.65 wind 9.0 30 < th dose independent rect. 3 23
122 87.65 atmosphere 1015.0 30 < th dose dependent rect. 2 1
123 87.71 temperature 30.0 30 < th dose dependent rect. 2 1
133 87.79 wind 1.0 30 > th dose independent rect. 2 1
148 88.04 precipitation 0.1 30 < th dose independent rect. 3 23
149 88.04 precipitation 0.1 30 < th dose dependent rect. 3 23
182 88.56 atmosphere 1015.0 30 < th dose independent rect. 3 23
187 88.73 humidity 90.0 14400 > th dose independent rect. 2 2
190 88.94 humidity 80.0 43200 < th dose dependent rect. 5 4
191 88.95 humidity 80.0 43200 < th dose dependent rect. 7 2
200 89.24 temperature 10.0 30 > th dose dependent rect. 3 23
202 89.26 precipitation 0.1 14400 < th dose independent rect. 1 4
203 89.26 radiation 10.0 30 < th dose independent rect. 3 23
204 89.26 precipitation 0.1 14400 < th dose dependent rect. 1 4
205 89.27 precipitation 0.1 14400 < th dose independent rect. 23 7
206 89.27 precipitation 0.1 14400 < th dose dependent rect. 23 7
207 89.30 precipitation 0.1 14400 > th dose independent rect. 1 4
208 89.31 precipitation 0.1 14400 > th dose independent rect. 23 7
209 89.33 precipitation 0.1 14400 > th dose dependent rect. 23 7
211 89.37 precipitation 0.1 14400 > th dose dependent rect. 1 4
213 89.43 atmosphere 1015.0 30 < th dose dependent rect. 3 23
219 89.57 humidity 90.0 43200 > th dose dependent rect. 4 1
220 89.58 wind 1.0 43200 > th dose independent rect. 19 1
228 89.66 humidity 70.0 43200 < th dose independent rect. 6 4
231 89.69 humidity 90.0 90 < th dose independent rect. 1 7
236 89.77 atmosphere 1005.0 90 > th dose dependent rect. 1 22
239 89.80 humidity 70.0 43200 < th dose independent rect. 20 14
240 89.80 atmosphere 1005.0 10 > th dose dependent sin 7 NA
241 89.80 atmosphere 1005.0 90 > th dose dependent sin 7 NA
247 89.85 humidity 60.0 43200 < th dose independent rect. 11 1
251 89.89 humidity 60.0 4320 < th dose dependent rect. 10 2
252 89.89 atmosphere 1005.0 270 > th dose dependent rect. 22 11
262 89.95 wind 1.0 43200 < th dose independent rect. 16 2
268 90.02 wind 1.0 43200 < th dose independent rect. 19 1
272 90.03 temperature 10.0 720 > th dose dependent rect. 3 1
273 90.03 atmosphere 1005.0 10 > th dose dependent rect. 1 23
274 90.04 humidity 60.0 43200 < th dose independent rect. 8 5
291 90.12 atmosphere 1005.0 10 > th dose dependent rect. 19 17
292 90.13 humidity 60.0 43200 < th dose independent rect. 19 18
297 90.14 wind 1.0 43200 < th dose dependent rect. 16 2
315 90.19 radiation 10.0 30 > th dose independent rect. 7 1
325 90.23 humidity 60.0 4320 < th dose independent rect. 10 1
329 90.23 atmosphere 1005.0 10 > th dose dependent rect. 11 22
333 90.25 humidity 90.0 14400 < th dose independent rect. 2 2
337 90.25 humidity 70.0 43200 < th dose dependent rect. 20 15
339 90.26 radiation 30.0 43200 > th dose independent rect. 16 17
343 90.27 atmosphere 1005.0 10 > th dose dependent rect. 2 10
345 90.28 radiation 30.0 43200 > th dose independent rect. 7 2
362 90.28 atmosphere 1005.0 90 > th dose dependent rect. 1 11
366 90.30 humidity 60.0 43200 > th dose independent rect. 11 1
372 90.30 atmosphere 1005.0 10 > th dose dependent rect. 19 19
378 90.31 atmosphere 1005.0 10 > th dose dependent rect. 2 12
380 90.32 wind 1.0 43200 > th dose independent rect. 16 3
386 90.34 humidity 80.0 10 < th dose independent rect. 6 2
401 90.35 humidity 60.0 4320 < th dose dependent rect. 19 17
402 90.36 humidity 70.0 43200 > th dose independent rect. 6 4
404 90.36 humidity 70.0 43200 > th dose independent rect. 20 14
458 90.41 radiation 30.0 43200 > th dose dependent rect. 8 1
461 90.41 atmosphere 1005.0 10 > th dose dependent rect. 19 21
462 90.42 wind 1.0 43200 > th dose independent rect. 1 2
467 90.43 humidity 70.0 43200 > th dose independent rect. 8 1
585 90.57 humidity 60.0 43200 < th dose independent sin 8 NA
596 90.59 humidity 60.0 43200 < th dose dependent rect. 12 2
610 90.60 radiation 10.0 30 < th dose dependent rect. 3 23
611 90.61 wind 1.0 43200 > th dose independent rect. 16 1
617 90.61 radiation 30.0 43200 > th dose dependent rect. 14 19
618 90.61 atmosphere 1005.0 10 > th dose dependent rect. 19 23
627 90.64 atmosphere 1005.0 30 > th dose independent rect. 2 10
629 90.65 radiation 20.0 43200 > th dose independent rect. 15 1
632 90.65 humidity 80.0 10 < th dose independent rect. 22 10
635 90.66 humidity 60.0 43200 > th dose independent rect. 20 16
671 90.68 temperature 25.0 10 < th dose independent rect. 11 16
716 90.72 radiation 10.0 4320 < th dose independent rect. 16 1
728 90.72 atmosphere 1005.0 10 > th dose dependent rect. 17 21
732 90.73 wind 1.0 30 < th dose independent rect. 24 3
734 90.73 humidity 90.0 90 < th dose independent rect. 19 13
741 90.73 atmosphere 1005.0 10 > th dose dependent rect. 15 21
743 90.74 wind 9.0 720 < th dose independent rect. 19 8
758 90.75 humidity 60.0 4320 < th dose independent rect. 19 17
767 90.75 humidity 60.0 43200 < th dose dependent rect. 12 23
768 90.75 atmosphere 1005.0 10 > th dose dependent rect. 17 23
784 90.76 humidity 70.0 43200 < th dose dependent sin 8 NA
788 90.76 atmosphere 1005.0 10 > th dose dependent rect. 15 23
793 90.77 humidity 60.0 43200 < th dose dependent rect. 16 23
801 90.78 humidity 60.0 43200 < th dose dependent rect. 11 11
814 90.79 radiation 40.0 43200 < th dose independent rect. 8 1
817 90.79 humidity 80.0 10 < th dose independent rect. 2 6
841 90.80 radiation 20.0 43200 < th dose independent rect. 15 1
843 90.80 humidity 80.0 10 < th dose independent rect. 24 8
847 90.80 humidity 60.0 43200 < th dose dependent rect. 7 15
870 90.81 radiation 30.0 43200 < th dose independent rect. 4 5
875 90.81 humidity 60.0 43200 < th dose dependent sin 21 NA
907 90.82 radiation 30.0 43200 < th dose independent rect. 6 3
925 90.82 humidity 60.0 43200 < th dose dependent rect. 11 7
951 90.82 atmosphere 1005.0 10 > th dose dependent rect. 13 23
955 90.83 humidity 60.0 43200 < th dose dependent no NA NA
958 90.83 humidity 60.0 43200 < th dose dependent rect. 7 11
981 90.83 humidity 60.0 43200 < th dose dependent rect. 20 22
992 90.84 humidity 60.0 4320 < th dose dependent sin 7 NA