Os11g0168300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alba, DNA/RNA-binding protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0168300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Alba, DNA/RNA-binding protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.69 | 0.219 | 12.1 | 0.811 | 0.504 | -1.45 | -0.097 | 1.42 | 0.204 | 1.59 | 10.88 | 1175 | -- | -- |
| 23.34 | 0.225 | 12.1 | 0.535 | 0.552 | -1.48 | 0.108 | -- | 0.135 | 1.03 | 14.6 | 1051 | -- | -- |
| 21.73 | 0.217 | 12.1 | 0.804 | 0.502 | -1.44 | -- | 1.37 | 0.202 | 1.62 | 10.7 | 1182 | -- | -- |
| 23.3 | 0.225 | 12.1 | 0.511 | 0.554 | -1.49 | -- | -- | 0.122 | 0.763 | 14.53 | 995 | -- | -- |
| 25.27 | 0.235 | 12.1 | 0.567 | -- | -1.6 | -- | 1.3 | 0.141 | -- | 1.397 | 1699 | -- | -- |
| 55.82 | 0.35 | 12.1 | 0.0882 | 0.331 | -- | 0.00529 | -- | -0.125 | 1.94 | -- | -- | -- | -- |
| 55.82 | 0.35 | 12.1 | 0.088 | 0.331 | -- | -- | -- | -0.125 | 1.94 | -- | -- | -- | -- |
| 26.7 | 0.242 | 12.1 | 0.387 | -- | -1.56 | -- | -- | 0.0926 | -- | 14.53 | 995 | -- | -- |
| 29.26 | 0.252 | 12.1 | -- | 0.522 | -1.26 | -- | -- | 0.0399 | 0.715 | 15 | 953 | -- | -- |
| 62.42 | 0.369 | 12.1 | 0.102 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 56.02 | 0.35 | 12.2 | -- | 0.332 | -- | -- | -- | -0.135 | 1.94 | -- | -- | -- | -- |
| 30.43 | 0.258 | 12.1 | -- | -- | -1.44 | -- | -- | 0.0359 | -- | 14.53 | 995 | -- | -- |
| 62.69 | 0.37 | 12.1 | -- | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 3 | 21.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 20 |
| 10 | 21.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 45 | 21.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 88 | 21.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 123 | 22.02 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 133 | 22.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 135 | 22.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 215 | 22.13 | temperature | 10 | 1440 | > th | dose dependent | sin | 2 | NA |
| 349 | 22.36 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 381 | 22.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 499 | 22.60 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 512 | 22.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 18 |
| 522 | 22.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 20 |
| 536 | 22.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 538 | 22.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 607 | 22.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 712 | 22.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 798 | 22.87 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 830 | 22.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 831 | 22.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 992 | 23.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |