Os11g0166300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0166300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.05 | 0.513 | 3.3 | -0.771 | 0.156 | 34.3 | -0.337 | -89.1 | 0.0432 | 7.98 | 49.1 | 12 | -- | -- |
| 131.72 | 0.539 | 3.04 | -0.0255 | 0.117 | -0.159 | -0.37 | -- | 0.0294 | 8.54 | 42.72 | 2495 | -- | -- |
| 118.8 | 0.508 | 3.33 | -0.83 | 0.182 | 37.7 | -- | -98 | 0.0794 | 8.26 | 49 | 11 | -- | -- |
| 129.75 | 0.531 | 3.02 | -0.06 | 0.138 | 0.465 | -- | -- | 0.0847 | 7.33 | 64.28 | 15 | -- | -- |
| 119.84 | 0.51 | 3.33 | -0.835 | -- | 37.6 | -- | -97.8 | 0.0438 | -- | 49 | 11 | -- | -- |
| 131.79 | 0.538 | 3.04 | -0.0316 | 0.114 | -- | -0.387 | -- | 0.03 | 8.52 | -- | -- | -- | -- |
| 132.25 | 0.539 | 3.04 | -0.043 | 0.115 | -- | -- | -- | 0.0305 | 9.09 | -- | -- | -- | -- |
| 130.51 | 0.532 | 3.03 | -0.0482 | -- | 0.438 | -- | -- | 0.0646 | -- | 64 | 15 | -- | -- |
| 129.75 | 0.531 | 3.03 | -- | 0.133 | 0.453 | -- | -- | 0.0742 | 6.84 | 64 | 15 | -- | -- |
| 133.01 | 0.539 | 3.04 | -0.0433 | -- | -- | -- | -- | 0.0311 | -- | -- | -- | -- | -- |
| 132.3 | 0.538 | 3.03 | -- | 0.115 | -- | -- | -- | 0.0353 | 9.12 | -- | -- | -- | -- |
| 130.58 | 0.532 | 3.03 | -- | -- | 0.445 | -- | -- | 0.0658 | -- | 64 | 15 | -- | -- |
| 133.06 | 0.538 | 3.04 | -- | -- | -- | -- | -- | 0.0359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.94 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 2 | 112.31 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 4 | 113.15 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 17 | 114.74 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 21 | 114.78 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 22 | 114.81 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 26 | 114.83 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 28 | 114.83 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 29 | 114.83 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 32 | 114.83 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 34 | 114.83 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 36 | 114.83 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 41 | 114.83 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 42 | 114.83 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 43 | 114.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 44 | 114.83 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 50 | 114.84 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 52 | 114.84 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 53 | 114.86 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 55 | 114.87 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 57 | 114.88 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 78 | 115.19 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 79 | 115.19 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 112 | 115.59 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 136 | 115.84 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 138 | 115.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 141 | 115.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 145 | 115.84 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 154 | 115.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 155 | 115.84 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 156 | 115.84 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 166 | 115.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 169 | 115.88 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 176 | 116.07 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 178 | 116.18 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 191 | 116.85 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 193 | 117.06 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 197 | 117.54 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 213 | 117.98 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 214 | 118.05 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 218 | 118.73 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 224 | 119.65 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 243 | 119.70 | humidity | 50.0 | 10 | < th | dose independent | rect. | 17 | 19 |
| 269 | 120.25 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 278 | 120.64 | humidity | 50.0 | 10 | < th | dose independent | rect. | 17 | 1 |
| 300 | 120.98 | humidity | 50.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 303 | 121.03 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 351 | 122.42 | humidity | 50.0 | 10 | < th | dose independent | sin | 9 | NA |
| 377 | 122.68 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 451 | 122.91 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 473 | 123.01 | humidity | 50.0 | 10 | < th | dose dependent | no | NA | NA |
| 652 | 123.35 | humidity | 50.0 | 10 | > th | dose independent | sin | 10 | NA |
| 690 | 123.78 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 706 | 123.90 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 711 | 123.95 | wind | 1.0 | 30 | < th | dose dependent | rect. | 9 | 5 |
| 717 | 124.03 | wind | 1.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 758 | 124.16 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 802 | 124.41 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 884 | 124.56 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 912 | 124.63 | humidity | 50.0 | 10 | > th | dose independent | sin | 15 | NA |
| 972 | 124.79 | humidity | 80.0 | 720 | > th | dose independent | rect. | 5 | 3 |