Os11g0160700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, FYVE/PHD-type domain containing protein.
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Os11g0160700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, FYVE/PHD-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.77 | 0.198 | 7.98 | 0.892 | 0.461 | -0.267 | -0.182 | -1.52 | 0.25 | 5.79 | 19.16 | 4743 | -- | -- |
| 19.02 | 0.203 | 8.05 | 0.822 | 0.46 | 0.335 | -0.29 | -- | 0.218 | 5.6 | 15.6 | 4800 | -- | -- |
| 17.85 | 0.197 | 7.98 | 0.889 | 0.461 | -0.269 | -- | -1.52 | 0.25 | 5.78 | 19.16 | 4763 | -- | -- |
| 19.05 | 0.203 | 8.04 | 0.82 | 0.461 | 0.347 | -- | -- | 0.227 | 5.74 | 15.68 | 4898 | -- | -- |
| 28.78 | 0.25 | 7.99 | 0.866 | -- | -0.333 | -- | -1.52 | 0.244 | -- | 19.1 | 5541 | -- | -- |
| 20.3 | 0.211 | 8.04 | 0.681 | 0.46 | -- | -0.183 | -- | 0.189 | 5.76 | -- | -- | -- | -- |
| 20.38 | 0.211 | 8.04 | 0.68 | 0.459 | -- | -- | -- | 0.19 | 5.75 | -- | -- | -- | -- |
| 29.08 | 0.252 | 8.05 | 0.732 | -- | 0.158 | -- | -- | 0.226 | -- | 27.19 | 6267 | -- | -- |
| 22.78 | 0.222 | 8.1 | -- | 0.47 | -0.462 | -- | -- | -0.0342 | 6.2 | 22.1 | 47520 | -- | -- |
| 31.31 | 0.261 | 8.05 | 0.694 | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
| 32.57 | 0.267 | 8.06 | -- | 0.47 | -- | -- | -- | 0.114 | 5.69 | -- | -- | -- | -- |
| 33.45 | 0.269 | 8.11 | -- | -- | -0.476 | -- | -- | -0.0425 | -- | 22.09 | 47520 | -- | -- |
| 44.03 | 0.31 | 8.07 | -- | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.59 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 2 | 17.60 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 3 | 17.61 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 9 | 17.67 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 22 |
| 12 | 17.73 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 14 | 17.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 6 |
| 18 | 17.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 19 | 17.75 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 23 | 17.76 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 21 |
| 28 | 17.77 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 33 | 17.79 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 35 | 17.79 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 6 | 18 |
| 36 | 17.79 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 18 |
| 40 | 17.80 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 42 | 17.80 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 20 |
| 45 | 17.81 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 53 | 17.81 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 15 |
| 72 | 17.82 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 75 | 17.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 6 | 20 |
| 79 | 17.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 16 |
| 83 | 17.83 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 88 | 17.83 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 104 | 17.84 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 13 |
| 105 | 17.84 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 111 | 17.85 | wind | 1.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 126 | 17.85 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 12 | 12 |
| 127 | 17.85 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 132 | 17.86 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 153 | 17.86 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 8 | 16 |
| 159 | 17.86 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 161 | 17.87 | temperature | 20.0 | 4320 | < th | dose independent | sin | 19 | NA |
| 162 | 17.87 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 187 | 17.87 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 20 |
| 196 | 17.88 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 210 | 17.88 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 8 | 16 |
| 222 | 17.89 | temperature | 20.0 | 4320 | > th | dose independent | sin | 19 | NA |
| 223 | 17.89 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 271 | 17.90 | humidity | 50.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 287 | 17.90 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 11 | 13 |
| 313 | 17.91 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 345 | 17.91 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 16 |
| 370 | 17.92 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 373 | 17.92 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 404 | 17.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 406 | 17.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 22 |
| 412 | 17.93 | humidity | 50.0 | 43200 | < th | dose independent | sin | 20 | NA |
| 458 | 17.93 | wind | 1.0 | 43200 | < th | dose dependent | sin | 22 | NA |
| 459 | 17.93 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 460 | 17.93 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 465 | 17.94 | temperature | 20.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 535 | 17.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 17 |
| 541 | 17.95 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 543 | 17.95 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 595 | 17.95 | temperature | 20.0 | 4320 | < th | dose dependent | sin | 17 | NA |
| 600 | 17.95 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 606 | 17.96 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 672 | 17.96 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 722 | 17.97 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 760 | 17.97 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 761 | 17.97 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 766 | 17.97 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 20 |
| 864 | 17.98 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 865 | 17.98 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 22 |
| 884 | 17.99 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 943 | 17.99 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 947 | 17.99 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 958 | 17.99 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 10 | 17 |
| 969 | 18.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 970 | 18.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 990 | 18.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 14 |