Os11g0156800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0156800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.99 | 0.579 | 7.34 | 1.9 | 1.36 | -3.49 | 1.05 | -5.24 | 0.438 | 21.6 | 20.2 | 295 | -- | -- |
| 158.22 | 0.586 | 7.4 | 1.87 | 1.43 | -1.46 | 1.17 | -- | 0.422 | 21.5 | 20.86 | 148 | -- | -- |
| 156.01 | 0.582 | 7.34 | 1.87 | 1.36 | -3.49 | -- | -5.25 | 0.437 | 21.6 | 20.22 | 304 | -- | -- |
| 163.04 | 0.595 | 7.4 | 1.81 | 1.42 | -1.51 | -- | -- | 0.421 | 21.6 | 20.8 | 151 | -- | -- |
| 253.68 | 0.742 | 7.32 | 1.97 | -- | -3.22 | -- | -4.95 | 0.399 | -- | 20.86 | 452 | -- | -- |
| 172.95 | 0.617 | 7.37 | 2.14 | 1.39 | -- | 1.37 | -- | 0.542 | 21.2 | -- | -- | -- | -- |
| 179.5 | 0.627 | 7.37 | 2.08 | 1.38 | -- | -- | -- | 0.539 | 21.4 | -- | -- | -- | -- |
| 259.8 | 0.751 | 7.39 | 1.68 | -- | -1.59 | -- | -- | 0.302 | -- | 22.6 | 681 | -- | -- |
| 238.38 | 0.719 | 7.45 | -- | 1.39 | -2.64 | -- | -- | 0.154 | 21.8 | 20.9 | 313 | -- | -- |
| 291.15 | 0.797 | 7.33 | 2.09 | -- | -- | -- | -- | 0.534 | -- | -- | -- | -- | -- |
| 294 | 0.802 | 7.42 | -- | 1.38 | -- | -- | -- | 0.307 | 21.5 | -- | -- | -- | -- |
| 309.27 | 0.819 | 7.47 | -- | -- | -2.28 | -- | -- | -0.0867 | -- | 29.42 | 711 | -- | -- |
| 406.54 | 0.941 | 7.39 | -- | -- | -- | -- | -- | 0.302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.92 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 3 | 147.06 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 12 |
| 4 | 147.14 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 15 | 147.40 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 17 | 147.49 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 15 |
| 18 | 147.63 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 9 |
| 19 | 147.63 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 21 | 147.92 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 23 | 147.92 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 24 | 147.92 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 25 | 147.92 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 27 | 147.96 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 15 |
| 29 | 148.14 | radiation | 1.0 | 10 | < th | dose independent | sin | 5 | NA |
| 30 | 148.22 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 48 | 148.61 | radiation | 1.0 | 10 | > th | dose independent | sin | 5 | NA |
| 52 | 148.77 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 57 | 148.90 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 63 | 149.05 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 18 |
| 66 | 149.13 | radiation | 1.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 72 | 149.28 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 9 |
| 73 | 149.36 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 75 | 149.38 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 18 |
| 76 | 149.41 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 92 | 149.50 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 15 |
| 93 | 149.50 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 15 |
| 98 | 149.64 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 20 |
| 116 | 149.89 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 9 |
| 122 | 149.91 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 124 | 149.91 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 145 | 150.18 | temperature | 20.0 | 720 | > th | dose independent | sin | 19 | NA |
| 153 | 150.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 158 | 150.37 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 15 |
| 166 | 150.46 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 18 |
| 171 | 150.50 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 18 |
| 172 | 150.52 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 208 | 150.85 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 17 |
| 216 | 150.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 220 | 151.02 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 7 |
| 229 | 151.10 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 9 |
| 251 | 151.27 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 14 | 15 |
| 259 | 151.32 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 286 | 151.55 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 7 |
| 296 | 151.60 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 15 |
| 297 | 151.60 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 329 | 151.94 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 342 | 152.02 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 15 |
| 350 | 152.10 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 364 | 152.24 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 374 | 152.28 | temperature | 20.0 | 270 | < th | dose dependent | no | NA | NA |
| 505 | 152.89 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 513 | 152.89 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 514 | 152.89 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 515 | 152.90 | temperature | 30.0 | 10 | < th | dose independent | rect. | 14 | 15 |
| 522 | 152.95 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 529 | 153.00 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 531 | 153.01 | wind | 9.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 533 | 153.01 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 534 | 153.01 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 537 | 153.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 543 | 153.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 10 |
| 544 | 153.01 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 546 | 153.01 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 547 | 153.02 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 583 | 153.16 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 15 |
| 605 | 153.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 608 | 153.27 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 612 | 153.31 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 625 | 153.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 644 | 153.41 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 669 | 153.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 671 | 153.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 679 | 153.59 | temperature | 20.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 691 | 153.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 705 | 153.71 | temperature | 20.0 | 720 | < th | dose independent | sin | 18 | NA |
| 732 | 153.83 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 745 | 153.84 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 17 |
| 787 | 153.94 | wind | 9.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 842 | 154.12 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 18 |
| 865 | 154.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 868 | 154.20 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 917 | 154.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 921 | 154.37 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 935 | 154.43 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 20 |
| 939 | 154.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 10 |
| 940 | 154.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 944 | 154.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 994 | 154.63 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |