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Os11g0155000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Dcp1-like decapping family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.89 (0.0237) R2 : 0.536
β1 : 1.99 (0.0868) R2dD : 0.553 R2D : 0.486
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.309 (0.0506) R2dN8 : 0.0508 R2N8 : -0.0168
σ : 0.445
deviance : 90.71
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.39 0.374 7.89 2.02 0.513 0.454 0.549 0.423 0.303 10.3 29.1 4427 -- --
63.12 0.37 7.87 2.12 0.498 0.499 0.559 -- 0.339 10.2 29 3204 -- --
64.59 0.374 7.89 2.02 0.512 0.447 -- 0.515 0.3 10.2 29.1 4462 -- --
64.37 0.374 7.87 2.14 0.495 0.512 -- -- 0.341 10.1 29 3227 -- --
76.74 0.408 7.88 1.98 -- 0.591 -- 0.642 0.393 -- 27.5 2363 -- --
71.92 0.398 7.88 1.97 0.536 -- 0.594 -- 0.31 10.4 -- -- -- --
73.34 0.401 7.88 2 0.534 -- -- -- 0.311 10.3 -- -- -- --
76.55 0.407 7.87 2.2 -- 0.623 -- -- 0.409 -- 28.2 2363 -- --
108.8 0.486 7.93 -- 0.5 -1.06 -- -- 0.099 10.4 35.1 47432 -- --
90.71 0.445 7.89 1.99 -- -- -- -- 0.309 -- -- -- -- --
178.46 0.625 7.93 -- 0.525 -- -- -- 0.0883 10 -- -- -- --
124.92 0.521 7.92 -- -- -1.09 -- -- 0.207 -- 35.19 47520 -- --
195.06 0.652 7.94 -- -- -- -- -- 0.0887 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.56 temperature 15.0 10 > th dose independent rect. 20 6
3 62.15 humidity 70.0 43200 > th dose dependent rect. 14 10
4 62.16 humidity 70.0 43200 > th dose dependent rect. 7 19
5 62.17 humidity 70.0 43200 > th dose dependent rect. 4 21
6 62.19 humidity 70.0 43200 > th dose dependent sin 17 NA
19 62.28 humidity 80.0 43200 > th dose dependent rect. 21 1
23 62.30 humidity 70.0 43200 > th dose dependent rect. 12 13
42 62.42 precipitation 0.1 43200 > th dose dependent rect. 13 5
44 62.43 precipitation 0.1 43200 > th dose dependent rect. 14 7
62 62.52 wind 9.0 30 < th dose independent rect. 2 18
63 62.52 radiation 10.0 4320 < th dose dependent rect. 21 6
70 62.55 precipitation 0.1 43200 > th dose dependent rect. 17 5
83 62.60 radiation 10.0 10 < th dose dependent rect. 2 18
92 62.64 precipitation 0.1 43200 < th dose independent rect. 17 4
93 62.64 precipitation 0.1 43200 < th dose dependent rect. 17 4
104 62.71 precipitation 0.1 43200 < th dose independent rect. 17 2
105 62.71 precipitation 0.1 43200 < th dose dependent rect. 17 2
112 62.73 precipitation 0.1 43200 > th dose independent rect. 17 4
113 62.73 precipitation 0.1 30 < th dose independent rect. 2 18
115 62.73 precipitation 0.1 30 < th dose dependent rect. 2 18
119 62.75 precipitation 0.1 43200 > th dose independent rect. 17 2
143 62.80 precipitation 0.1 43200 > th dose dependent rect. 9 9
150 62.82 wind 1.0 10 > th dose independent rect. 20 6
160 62.84 humidity 70.0 43200 > th dose dependent no NA NA
168 62.88 humidity 70.0 43200 > th dose dependent sin 3 NA
170 62.88 precipitation 0.1 43200 > th dose dependent rect. 9 12
174 62.90 temperature 30.0 30 < th dose independent rect. 20 6
175 62.90 humidity 50.0 30 > th dose independent rect. 20 6
178 62.90 atmosphere 995.0 30 > th dose independent rect. 20 6
179 62.90 radiation 1.0 30 < th dose independent rect. 20 6
185 62.90 temperature 10.0 30 > th dose independent rect. 2 18
187 62.90 atmosphere 1015.0 30 < th dose independent rect. 2 18
188 62.90 radiation 1.0 30 < th dose dependent rect. 20 6
197 62.91 radiation 10.0 43200 > th dose independent rect. 10 1
221 62.92 temperature 10.0 1440 > th dose independent rect. 21 6
224 62.92 temperature 30.0 1440 < th dose independent rect. 21 6
228 62.92 humidity 50.0 1440 > th dose independent rect. 21 6
234 62.92 atmosphere 995.0 1440 > th dose independent rect. 21 6
235 62.92 radiation 1.0 1440 < th dose independent rect. 21 6
255 62.92 temperature 10.0 1440 > th dose independent rect. 3 18
266 62.94 humidity 50.0 10 > th dose independent rect. 2 18
273 62.95 precipitation 0.1 14400 > th dose independent rect. 19 6
282 62.96 wind 9.0 10 < th dose independent rect. 20 6
283 62.96 humidity 80.0 43200 > th dose independent rect. 2 19
287 62.97 precipitation 0.1 14400 < th dose independent rect. 19 6
288 62.97 precipitation 0.1 14400 < th dose dependent rect. 19 6
291 62.99 precipitation 0.1 30 < th dose independent rect. 20 6
292 62.99 precipitation 0.1 30 < th dose dependent rect. 20 6
296 63.00 wind 1.0 43200 < th dose dependent rect. 15 6
315 63.04 humidity 70.0 43200 > th dose dependent rect. 15 23
348 63.12 precipitation 0.1 43200 > th dose dependent sin 20 NA
352 63.12 humidity 70.0 43200 > th dose dependent rect. 2 13
354 63.13 wind 9.0 43200 < th dose independent rect. 20 1
359 63.14 humidity 80.0 43200 > th dose independent rect. 8 17
360 63.14 wind 9.0 43200 > th dose dependent rect. 20 12
385 63.18 humidity 80.0 43200 < th dose independent rect. 1 19
399 63.21 wind 3.0 14400 < th dose dependent rect. 15 1
405 63.23 wind 9.0 43200 > th dose independent rect. 20 1
408 63.23 wind 1.0 43200 > th dose independent rect. 16 5
409 63.23 wind 9.0 43200 > th dose dependent rect. 17 1
435 63.28 radiation 30.0 1440 > th dose independent rect. 7 1
452 63.29 precipitation 0.1 43200 < th dose independent rect. 19 2
454 63.29 precipitation 0.1 43200 < th dose dependent rect. 19 2
464 63.31 humidity 80.0 43200 < th dose independent sin 2 NA
466 63.31 humidity 80.0 43200 > th dose independent rect. 5 19
478 63.33 temperature 25.0 14400 > th dose dependent rect. 17 1
488 63.35 temperature 20.0 14400 < th dose independent rect. 24 1
490 63.35 humidity 80.0 43200 < th dose independent rect. 4 11
491 63.35 wind 9.0 43200 > th dose independent rect. 20 16
495 63.36 atmosphere 1010.0 30 < th dose independent rect. 20 6
496 63.36 wind 1.0 43200 > th dose independent rect. 15 8
497 63.36 temperature 25.0 14400 > th dose dependent rect. 17 3
510 63.39 temperature 15.0 270 > th dose independent rect. 20 3
511 63.39 humidity 80.0 43200 > th dose independent rect. 4 11
512 63.39 humidity 80.0 43200 > th dose independent rect. 11 14
518 63.40 wind 9.0 43200 > th dose independent rect. 20 13
524 63.41 temperature 20.0 43200 > th dose independent rect. 19 2
525 63.41 humidity 80.0 43200 < th dose independent rect. 3 13
531 63.42 humidity 80.0 43200 < th dose independent rect. 8 17
546 63.44 humidity 80.0 43200 > th dose independent sin 2 NA
547 63.44 precipitation 0.1 43200 > th dose independent rect. 19 2
550 63.44 wind 9.0 43200 < th dose independent rect. 20 13
551 63.44 humidity 80.0 43200 > th dose dependent sin 14 NA
560 63.46 humidity 80.0 43200 < th dose independent rect. 2 15
581 63.48 wind 9.0 43200 < th dose independent rect. 20 15
584 63.48 wind 1.0 43200 < th dose dependent rect. 1 3
589 63.48 humidity 80.0 43200 > th dose dependent rect. 16 17
630 63.52 precipitation 0.1 43200 > th dose dependent rect. 16 14
632 63.52 radiation 30.0 1440 > th dose dependent rect. 14 20
633 63.53 humidity 80.0 43200 > th dose independent sin 18 NA
636 63.53 temperature 30.0 14400 < th dose independent rect. 15 18
652 63.55 temperature 30.0 14400 < th dose independent rect. 15 11
655 63.55 temperature 30.0 14400 > th dose independent rect. 15 18
661 63.56 temperature 20.0 43200 < th dose independent rect. 21 1
663 63.56 temperature 30.0 14400 < th dose independent rect. 15 4
688 63.58 temperature 30.0 14400 > th dose independent rect. 15 4
695 63.58 atmosphere 1000.0 90 > th dose independent rect. 5 10
700 63.58 humidity 80.0 43200 > th dose independent rect. 3 13
708 63.58 temperature 25.0 1440 > th dose dependent rect. 12 3
716 63.59 temperature 30.0 14400 < th dose independent sin 12 NA
744 63.60 temperature 30.0 14400 > th dose independent sin 12 NA
760 63.61 temperature 20.0 14400 > th dose independent rect. 24 1
787 63.61 temperature 30.0 14400 > th dose dependent rect. 17 17
792 63.62 humidity 80.0 43200 > th dose independent rect. 2 16
824 63.64 humidity 80.0 43200 > th dose independent rect. 5 9
849 63.65 temperature 25.0 14400 < th dose independent rect. 7 1
855 63.65 temperature 25.0 14400 > th dose dependent sin 15 NA
857 63.65 temperature 10.0 14400 > th dose dependent rect. 17 1
870 63.66 radiation 1.0 4320 < th dose independent rect. 18 6
887 63.66 radiation 40.0 1440 > th dose independent rect. 14 20
923 63.67 wind 1.0 43200 < th dose dependent rect. 24 5
938 63.67 temperature 25.0 14400 > th dose dependent rect. 13 20
941 63.67 temperature 25.0 14400 > th dose dependent rect. 17 21
945 63.68 radiation 1.0 4320 < th dose independent rect. 18 2
973 63.68 temperature 25.0 14400 > th dose dependent rect. 13 17
988 63.69 radiation 1.0 4320 < th dose independent rect. 18 9