Os11g0154300 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0154300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF584 family protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	3.8	(0.0364)	R²	:	0.0851
β₁	:	0.717	(0.133)	R²_dD	:	0.0601	R²_D	:	0.067
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.201	(0.0778)	R²_dN8	:	0.018	R²_N8	:	0.025
σ	:	0.684
deviance	:	214.1
__

_____

C
peak time of C	:	--
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
186.11	0.641	3.79	0.614	0.337	-0.675	0.67	-1.38	-0.153	6.29	19.7	15	--	--
187.82	0.638	3.77	0.85	0.345	-0.74	0.933	--	-0.0933	5.85	19.52	14	--	--
187.13	0.637	3.79	0.645	0.349	-0.689	--	-1.39	-0.158	6.58	19.7	15	--	--
189.45	0.641	3.76	0.872	0.345	-0.789	--	--	-0.0731	6.8	19.6	15	--	--
192.27	0.646	3.79	0.663	--	-0.799	--	-1.48	-0.135	--	22.01	42	--	--
195.07	0.655	3.79	0.706	0.508	--	1.34	--	-0.208	4.55	--	--	--	--
199.73	0.662	3.79	0.697	0.522	--	--	--	-0.215	4.91	--	--	--	--
192.83	0.647	3.78	0.864	--	-0.893	--	--	-0.103	--	24.2	103	--	--
207.54	0.671	3.79	--	0.353	-0.592	--	--	-0.227	6.55	24.9	12	--	--
214.1	0.684	3.8	0.717	--	--	--	--	-0.201	--	--	--	--	--
212.55	0.682	3.81	--	0.535	--	--	--	-0.293	4.87	--	--	--	--
211.76	0.678	3.8	--	--	-0.76	--	--	-0.21	--	24.2	107	--	--
227.64	0.704	3.82	--	--	--	--	--	-0.281	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	177.11	temperature	15.0	30	> th	dose dependent	rect.	9	18
5	177.72	temperature	30.0	10	< th	dose independent	rect.	12	9
12	178.68	wind	3.0	43200	> th	dose independent	rect.	1	2
14	178.74	wind	9.0	14400	> th	dose dependent	rect.	12	1
16	179.00	wind	3.0	43200	< th	dose independent	rect.	1	2
21	179.30	temperature	15.0	10	> th	dose dependent	rect.	6	21
22	179.31	temperature	30.0	30	< th	dose independent	rect.	3	17
25	179.47	wind	3.0	43200	< th	dose independent	rect.	23	4
27	179.59	precipitation	0.1	720	< th	dose independent	rect.	1	8
28	179.59	precipitation	0.1	720	< th	dose dependent	rect.	1	8
37	180.04	wind	9.0	14400	< th	dose independent	rect.	3	11
39	180.08	radiation	10.0	1440	< th	dose independent	rect.	17	1
42	180.14	temperature	30.0	270	< th	dose independent	rect.	1	16
51	180.27	wind	5.0	43200	< th	dose dependent	rect.	1	1
52	180.31	radiation	10.0	1440	< th	dose independent	rect.	17	13
54	180.34	wind	9.0	14400	< th	dose independent	rect.	23	15
56	180.36	temperature	30.0	270	< th	dose independent	rect.	11	8
62	180.42	wind	3.0	1440	< th	dose independent	rect.	8	1
77	180.59	atmosphere	1000.0	30	> th	dose independent	rect.	13	8
79	180.64	wind	1.0	30	> th	dose independent	rect.	21	16
82	180.67	humidity	80.0	14400	< th	dose dependent	rect.	5	2
85	180.73	wind	3.0	1440	> th	dose independent	rect.	8	1
86	180.74	wind	9.0	14400	> th	dose independent	rect.	12	1
92	180.78	wind	9.0	14400	> th	dose independent	rect.	4	9
93	180.78	radiation	10.0	1440	< th	dose independent	rect.	17	11
105	180.90	wind	1.0	30	> th	dose independent	rect.	13	8
106	180.91	radiation	10.0	1440	< th	dose independent	rect.	17	6
115	181.00	atmosphere	995.0	270	> th	dose independent	rect.	10	10
138	181.19	wind	9.0	14400	< th	dose independent	rect.	12	1
139	181.19	wind	3.0	1440	< th	dose independent	rect.	8	3
145	181.23	wind	1.0	270	> th	dose independent	rect.	10	10
151	181.27	wind	9.0	14400	> th	dose independent	rect.	21	17
157	181.36	humidity	50.0	30	> th	dose independent	rect.	21	16
158	181.37	wind	9.0	14400	> th	dose independent	rect.	10	3
165	181.42	humidity	80.0	14400	> th	dose independent	rect.	5	1
176	181.51	atmosphere	995.0	30	> th	dose dependent	rect.	13	8
178	181.52	wind	9.0	30	< th	dose independent	rect.	13	8
180	181.54	wind	3.0	1440	> th	dose independent	rect.	8	3
189	181.58	temperature	10.0	1440	> th	dose independent	rect.	14	8
192	181.58	temperature	10.0	1440	> th	dose independent	rect.	22	16
195	181.58	atmosphere	995.0	1440	> th	dose independent	rect.	22	16
201	181.62	radiation	20.0	1440	< th	dose independent	rect.	21	10
209	181.69	temperature	10.0	30	> th	dose independent	rect.	13	8
211	181.69	atmosphere	1010.0	30	< th	dose independent	rect.	13	8
213	181.69	temperature	10.0	30	> th	dose independent	rect.	21	16
214	181.69	atmosphere	995.0	30	> th	dose independent	rect.	21	16
216	181.71	wind	9.0	14400	< th	dose independent	sin	5	NA
220	181.72	wind	3.0	1440	< th	dose independent	rect.	10	1
223	181.73	humidity	80.0	14400	< th	dose independent	rect.	4	3
235	181.80	wind	1.0	43200	> th	dose dependent	rect.	1	1
240	181.82	wind	9.0	14400	> th	dose dependent	rect.	5	8
251	181.88	wind	9.0	14400	> th	dose dependent	rect.	21	17
262	181.91	precipitation	0.1	30	< th	dose independent	rect.	13	8
264	181.91	precipitation	0.1	30	< th	dose dependent	rect.	13	8
266	181.92	wind	3.0	1440	< th	dose dependent	rect.	8	3
307	182.10	wind	9.0	14400	> th	dose dependent	rect.	24	14
324	182.15	wind	9.0	14400	> th	dose independent	sin	5	NA
327	182.15	wind	9.0	14400	> th	dose dependent	rect.	3	11
329	182.16	wind	3.0	720	> th	dose independent	rect.	8	5
330	182.16	humidity	80.0	14400	< th	dose dependent	rect.	24	1
338	182.20	wind	9.0	30	> th	dose dependent	rect.	21	15
344	182.22	radiation	20.0	1440	< th	dose independent	rect.	24	7
346	182.22	temperature	20.0	10	> th	dose dependent	rect.	9	13
360	182.30	wind	3.0	1440	> th	dose independent	rect.	10	1
370	182.34	precipitation	0.1	30	< th	dose independent	rect.	21	16
373	182.34	radiation	10.0	1440	> th	dose dependent	rect.	17	13
374	182.34	precipitation	0.1	30	< th	dose dependent	rect.	21	16
389	182.38	radiation	40.0	10	< th	dose independent	rect.	12	9
392	182.39	radiation	10.0	90	< th	dose independent	rect.	2	18
417	182.45	wind	9.0	270	< th	dose independent	rect.	10	10
426	182.49	atmosphere	1015.0	30	< th	dose dependent	rect.	9	18
427	182.50	precipitation	0.1	270	< th	dose independent	rect.	23	8
429	182.50	precipitation	0.1	270	< th	dose dependent	rect.	23	8
432	182.51	radiation	20.0	90	< th	dose dependent	rect.	2	18
434	182.52	radiation	10.0	1440	> th	dose dependent	rect.	17	1
456	182.54	temperature	10.0	30	> th	dose dependent	rect.	13	23
472	182.60	wind	9.0	10	< th	dose independent	rect.	21	16
475	182.61	wind	5.0	43200	< th	dose dependent	rect.	23	4
478	182.62	wind	9.0	14400	> th	dose dependent	sin	5	NA
481	182.63	radiation	10.0	1440	> th	dose independent	rect.	17	13
500	182.67	radiation	20.0	1440	< th	dose independent	rect.	6	1
501	182.67	atmosphere	1015.0	270	< th	dose independent	rect.	23	7
526	182.75	wind	9.0	14400	> th	dose dependent	rect.	9	5
534	182.78	wind	9.0	30	> th	dose dependent	rect.	11	1
549	182.83	humidity	50.0	270	> th	dose independent	rect.	20	14
584	182.91	temperature	10.0	270	> th	dose independent	rect.	10	10
585	182.91	atmosphere	1015.0	270	< th	dose independent	rect.	10	10
586	182.91	temperature	10.0	270	> th	dose independent	rect.	20	14
587	182.91	atmosphere	995.0	270	> th	dose independent	rect.	20	14
588	182.91	wind	1.0	43200	> th	dose dependent	rect.	23	4
593	182.94	temperature	10.0	30	> th	dose dependent	rect.	13	8
599	182.96	humidity	60.0	4320	> th	dose independent	rect.	18	17
601	182.97	wind	9.0	270	< th	dose independent	rect.	20	14
611	182.99	radiation	10.0	1440	> th	dose independent	rect.	17	1
635	183.01	wind	9.0	30	> th	dose dependent	sin	7	NA
637	183.01	radiation	10.0	14400	< th	dose dependent	rect.	21	6
662	183.11	precipitation	0.1	270	< th	dose independent	rect.	10	10
664	183.11	precipitation	0.1	270	< th	dose dependent	rect.	10	10
668	183.13	precipitation	0.1	270	< th	dose independent	rect.	3	1
669	183.13	precipitation	0.1	270	< th	dose dependent	rect.	3	1
679	183.15	atmosphere	1000.0	270	> th	dose independent	rect.	23	8
684	183.16	temperature	25.0	270	< th	dose independent	rect.	23	8
690	183.18	humidity	60.0	4320	< th	dose independent	rect.	17	18
691	183.18	temperature	30.0	30	< th	dose dependent	rect.	3	17
695	183.19	wind	1.0	720	> th	dose dependent	rect.	8	5
721	183.26	temperature	30.0	30	< th	dose independent	rect.	12	21
732	183.28	temperature	10.0	30	> th	dose dependent	rect.	9	23
736	183.30	radiation	40.0	10	< th	dose independent	rect.	3	18
756	183.34	radiation	30.0	270	< th	dose dependent	rect.	23	8
770	183.38	wind	9.0	270	< th	dose dependent	rect.	23	7
778	183.40	temperature	30.0	30	< th	dose independent	rect.	21	16
795	183.46	radiation	20.0	270	< th	dose independent	rect.	23	8
803	183.48	humidity	70.0	270	> th	dose independent	rect.	23	8
808	183.49	wind	1.0	1440	> th	dose dependent	rect.	8	1
814	183.51	humidity	50.0	10	> th	dose independent	rect.	13	8
832	183.53	atmosphere	1015.0	10	< th	dose dependent	rect.	6	21
838	183.54	precipitation	0.1	720	< th	dose independent	rect.	21	16
839	183.54	precipitation	0.1	720	< th	dose dependent	rect.	21	16
865	183.60	wind	9.0	270	< th	dose independent	rect.	23	8
866	183.60	temperature	10.0	270	> th	dose independent	rect.	23	8
868	183.60	humidity	50.0	270	> th	dose independent	rect.	23	8
879	183.60	temperature	10.0	270	> th	dose independent	rect.	7	16
899	183.62	temperature	20.0	10	> th	dose dependent	rect.	9	9
920	183.66	humidity	60.0	4320	> th	dose independent	rect.	9	2
930	183.67	precipitation	0.1	270	< th	dose independent	rect.	1	4
935	183.67	precipitation	0.1	270	< th	dose dependent	rect.	1	4
940	183.67	temperature	20.0	10	> th	dose dependent	rect.	20	22
987	183.75	wind	5.0	43200	< th	dose dependent	rect.	22	6
988	183.75	temperature	30.0	10	< th	dose dependent	rect.	12	8