Os11g0151800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Purple acid phosphatase.
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Os11g0151800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Purple acid phosphatase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 368.04 | 0.901 | 3.79 | 2.68 | 1.21 | -2.02 | -2.13 | 7.2 | 0.377 | 9.8 | 25.81 | 5595 | -- | -- |
| 374.23 | 0.901 | 3.91 | 2.56 | 1.26 | -2.53 | -2.13 | -- | 0.521 | 9.81 | 21.2 | 24774 | -- | -- |
| 384.83 | 0.914 | 3.77 | 2.7 | 1.26 | -1.98 | -- | 7.37 | 0.425 | 9.98 | 25.9 | 5957 | -- | -- |
| 392.92 | 0.923 | 3.91 | 2.56 | 1.26 | -2.63 | -- | -- | 0.534 | 9.76 | 20.8 | 24153 | -- | -- |
| 468.54 | 1.01 | 3.79 | 2.73 | -- | -2 | -- | 6.77 | 0.507 | -- | 25.6 | 6437 | -- | -- |
| 478.86 | 1.03 | 4.15 | -0.0965 | 1.29 | -- | -2.13 | -- | -0.54 | 9.98 | -- | -- | -- | -- |
| 496.52 | 1.04 | 4.15 | -0.179 | 1.3 | -- | -- | -- | -0.544 | 9.97 | -- | -- | -- | -- |
| 484.28 | 1.02 | 3.95 | 2.44 | -- | -2.64 | -- | -- | 0.516 | -- | 21.2 | 22545 | -- | -- |
| 414.2 | 0.948 | 4.02 | -- | 1.35 | -1.44 | -- | -- | 0.018 | 9.5 | 23.1 | 7277 | -- | -- |
| 598.49 | 1.14 | 4.19 | -0.195 | -- | -- | -- | -- | -0.545 | -- | -- | -- | -- | -- |
| 497.37 | 1.04 | 4.15 | -- | 1.3 | -- | -- | -- | -0.524 | 9.98 | -- | -- | -- | -- |
| 508.51 | 1.05 | 4.07 | -- | -- | -1.4 | -- | -- | -0.0533 | -- | 26.29 | 7999 | -- | -- |
| 599.5 | 1.14 | 4.18 | -- | -- | -- | -- | -- | -0.523 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 357.78 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 2 | 357.84 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 5 | 358.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 8 | 358.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 12 | 359.94 | temperature | 20 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 13 | 360.38 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 16 | 360.65 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 20 | 360.91 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 21 | 361.12 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 22 | 361.38 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 35 | 362.17 | temperature | 20 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 36 | 362.18 | temperature | 25 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 43 | 362.43 | temperature | 20 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 44 | 362.44 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 62 | 362.92 | temperature | 20 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 67 | 363.00 | temperature | 20 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 69 | 363.07 | temperature | 20 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 118 | 363.87 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 175 | 365.38 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 210 | 366.72 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 227 | 367.07 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 228 | 367.09 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 229 | 367.10 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 3 |
| 241 | 367.34 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 253 | 367.51 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 256 | 367.54 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 262 | 367.62 | temperature | 20 | 14400 | < th | dose independent | sin | 10 | NA |
| 278 | 367.84 | temperature | 20 | 14400 | > th | dose independent | sin | 10 | NA |
| 288 | 367.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 317 | 368.20 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 330 | 368.37 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 340 | 368.48 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 355 | 368.64 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 372 | 368.86 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 379 | 368.92 | temperature | 25 | 14400 | > th | dose independent | sin | 23 | NA |
| 414 | 369.27 | temperature | 25 | 14400 | < th | dose independent | sin | 23 | NA |
| 417 | 369.28 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 434 | 369.44 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 4 |
| 439 | 369.46 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 444 | 369.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 6 |
| 452 | 369.60 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 457 | 369.64 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 458 | 369.64 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 464 | 369.67 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 470 | 369.69 | radiation | 10 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 473 | 369.69 | radiation | 10 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 489 | 369.74 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 11 |
| 527 | 369.96 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 557 | 370.13 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 688 | 370.79 | radiation | 10 | 43200 | < th | dose independent | sin | 12 | NA |
| 691 | 370.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 4 |
| 700 | 370.81 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 866 | 371.60 | temperature | 20 | 14400 | < th | dose dependent | rect. | 18 | 8 |