Os11g0151200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0151200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 286.91 | 0.796 | 4.84 | 1.36 | 1.12 | -1.97 | 1.68 | -2.14 | -0.0724 | 16 | 20.11 | 7 | -- | -- |
| 288.8 | 0.791 | 4.8 | 1.72 | 1.14 | -2.07 | 1.05 | -- | 0.0339 | 16 | 20.7 | 2 | -- | -- |
| 290.97 | 0.801 | 4.81 | 1.62 | 1.13 | -2.03 | -- | -0.623 | 0.00282 | 16 | 20.5 | 2 | -- | -- |
| 291.28 | 0.8 | 4.79 | 1.72 | 1.14 | -2.07 | -- | -- | 0.0331 | 15.9 | 20.68 | 2 | -- | -- |
| 340.02 | 0.864 | 4.84 | 1.33 | -- | -1.06 | -- | -1.01 | -0.196 | -- | 20.5 | 2 | -- | -- |
| 353.04 | 0.881 | 4.87 | 1.31 | 0.522 | -- | 0.903 | -- | -0.314 | 18.4 | -- | -- | -- | -- |
| 355.05 | 0.882 | 4.87 | 1.3 | 0.527 | -- | -- | -- | -0.311 | 18.3 | -- | -- | -- | -- |
| 340.97 | 0.864 | 4.82 | 1.5 | -- | -1.12 | -- | -- | -0.146 | -- | 20.4 | 2 | -- | -- |
| 364.08 | 0.894 | 4.86 | -- | 0.918 | -1.49 | -- | -- | -0.243 | 16.3 | 20.9 | 2 | -- | -- |
| 369.44 | 0.898 | 4.86 | 1.29 | -- | -- | -- | -- | -0.323 | -- | -- | -- | -- | -- |
| 399.72 | 0.935 | 4.91 | -- | 0.509 | -- | -- | -- | -0.456 | 18.4 | -- | -- | -- | -- |
| 397.8 | 0.932 | 4.87 | -- | -- | -0.801 | -- | -- | -0.356 | -- | 20.6 | 2 | -- | -- |
| 413.18 | 0.949 | 4.9 | -- | -- | -- | -- | -- | -0.466 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 274.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 5 | 278.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 45 | 286.36 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 49 | 287.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 53 | 287.53 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 59 | 288.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 68 | 289.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 69 | 289.01 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 73 | 289.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 79 | 289.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 86 | 290.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 88 | 290.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 93 | 290.60 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 99 | 290.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 101 | 290.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 107 | 291.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 111 | 291.46 | radiation | 10 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 123 | 291.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 137 | 292.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 150 | 293.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 158 | 293.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 172 | 294.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 183 | 294.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 203 | 295.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 264 | 297.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 269 | 297.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 287 | 298.09 | temperature | 25 | 90 | < th | dose independent | rect. | 12 | 23 |
| 294 | 298.31 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 16 |
| 300 | 298.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 302 | 298.60 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 321 | 298.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 9 |
| 328 | 299.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 394 | 300.00 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 410 | 300.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 411 | 300.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 437 | 300.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 457 | 300.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 462 | 300.43 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 466 | 300.44 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 499 | 300.61 | temperature | 25 | 10 | < th | dose dependent | sin | 21 | NA |
| 661 | 301.43 | radiation | 20 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 665 | 301.45 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 22 |
| 800 | 302.07 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 872 | 302.40 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 894 | 302.49 | temperature | 25 | 90 | > th | dose independent | rect. | 17 | 23 |
| 924 | 302.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 21 |