Os11g0149400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phytosulfokines 2 precursor [Contains: Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
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Os11g0149400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phytosulfokines 2 precursor [Contains: Phytosulfokine-alpha (PSK- alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)].
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 416 | 0.958 | 8.7 | -1.7 | 0.261 | 4.87 | -1.75 | -9.98 | -0.0645 | 10.7 | 20.43 | 1396 | -- | -- |
| 452.13 | 0.99 | 8.51 | -0.393 | 0.366 | 6.25 | -1.38 | -- | -0.0118 | 9.32 | 10.1 | 8187 | -- | -- |
| 425.72 | 0.961 | 8.71 | -1.97 | 0.352 | 4.81 | -- | -10.4 | -0.113 | 7.48 | 20.87 | 1463 | -- | -- |
| 457.57 | 0.996 | 8.51 | -0.461 | 0.413 | 6.27 | -- | -- | -0.0242 | 7.94 | 9.637 | 8164 | -- | -- |
| 431.3 | 0.967 | 8.72 | -1.85 | -- | 4.81 | -- | -10.1 | -0.0914 | -- | 20.75 | 1439 | -- | -- |
| 1088.14 | 1.55 | 8.11 | 2.83 | 0.317 | -- | 1.42 | -- | 1.79 | 2.57 | -- | -- | -- | -- |
| 1090.88 | 1.55 | 8.11 | 2.8 | 0.448 | -- | -- | -- | 1.77 | 5.19 | -- | -- | -- | -- |
| 465.31 | 1 | 8.53 | -0.479 | -- | 6.2 | -- | -- | -0.0423 | -- | -16 | 8416 | -- | -- |
| 461.14 | 1 | 8.48 | -- | 0.445 | 6.01 | -- | -- | 0.104 | 7.76 | 10.01 | 8075 | -- | -- |
| 1101.38 | 1.55 | 8.12 | 2.81 | -- | -- | -- | -- | 1.79 | -- | -- | -- | -- | -- |
| 1296.83 | 1.68 | 8.18 | -- | 0.497 | -- | -- | -- | 1.46 | 4.98 | -- | -- | -- | -- |
| 469.42 | 1.01 | 8.5 | -- | -- | 5.92 | -- | -- | 0.0811 | -- | -12.37 | 8370 | -- | -- |
| 1309.83 | 1.69 | 8.19 | -- | -- | -- | -- | -- | 1.47 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 393.64 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 2 | 394.81 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 3 | 396.88 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 14 | 400.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 18 | 401.08 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 16 |
| 21 | 401.52 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 17 |
| 24 | 402.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 20 |
| 53 | 404.55 | humidity | 90 | 43200 | > th | dose dependent | sin | 1 | NA |
| 56 | 404.72 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 57 | 404.72 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 60 | 404.73 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 61 | 404.74 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 68 | 404.83 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 17 |
| 82 | 405.36 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 88 | 405.42 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 92 | 405.55 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 106 | 406.10 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 110 | 406.16 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 119 | 406.62 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 134 | 407.06 | radiation | 1 | 43200 | < th | dose dependent | sin | 15 | NA |
| 154 | 407.77 | humidity | 90 | 43200 | < th | dose independent | sin | 19 | NA |
| 185 | 408.58 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 207 | 409.16 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 209 | 409.18 | humidity | 90 | 43200 | > th | dose dependent | sin | 19 | NA |
| 220 | 409.42 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 232 | 409.49 | humidity | 90 | 43200 | > th | dose independent | sin | 19 | NA |
| 258 | 409.70 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 20 |
| 261 | 409.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 10 |
| 288 | 409.85 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 302 | 410.05 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 309 | 410.10 | radiation | 1 | 43200 | > th | dose independent | sin | 14 | NA |
| 314 | 410.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 13 |
| 315 | 410.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 16 |
| 317 | 410.22 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 344 | 410.40 | humidity | 90 | 43200 | > th | dose independent | sin | 2 | NA |
| 358 | 410.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 367 | 410.60 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 432 | 411.09 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 488 | 411.48 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 528 | 411.58 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 543 | 411.60 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 564 | 411.76 | radiation | 1 | 43200 | < th | dose independent | sin | 14 | NA |
| 565 | 411.79 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 571 | 411.87 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 576 | 411.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 6 |
| 591 | 412.08 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 610 | 412.32 | humidity | 90 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 659 | 412.87 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 671 | 413.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 22 |
| 697 | 413.33 | radiation | 1 | 43200 | > th | dose independent | no | NA | NA |
| 771 | 413.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 775 | 413.69 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 793 | 413.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 813 | 413.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 824 | 414.01 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 831 | 414.02 | radiation | 1 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 833 | 414.02 | radiation | 1 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 837 | 414.02 | radiation | 1 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 838 | 414.03 | radiation | 1 | 43200 | < th | dose independent | no | NA | NA |
| 898 | 414.27 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 934 | 414.78 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 936 | 414.79 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 972 | 415.14 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 992 | 415.36 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 993 | 415.37 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 9 |