Os11g0149200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0149200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 259.83 | 0.757 | 3.01 | 0.3 | 0.179 | 1.67 | -0.434 | 4.9 | 0.02 | 2.05 | 19.8 | 91 | 2.98 | 2.06 |
| 278.65 | 0.777 | 3 | 0.429 | 0.17 | 1.75 | 0.239 | -- | 0.0428 | 2.93 | 20.1 | 89 | 2.77 | 2.25 |
| 260.48 | 0.752 | 3.01 | 0.302 | 0.176 | 1.67 | -- | 4.81 | 0.0257 | 1.57 | 19.81 | 91 | 2.98 | 2.06 |
| 278.8 | 0.778 | 3 | 0.445 | 0.168 | 1.74 | -- | -- | 0.0425 | 1.37 | 20.02 | 84 | 2.83 | 2.27 |
| 262.34 | 0.754 | 3 | 0.328 | -- | 1.75 | -- | 4.66 | 0.0302 | -- | 19.82 | 90 | 2.99 | 2.08 |
| 297.21 | 0.808 | 3.01 | 0.448 | 0.284 | -- | 0.452 | -- | 0.00265 | 3.58 | -- | -- | -- | -- |
| 297.72 | 0.808 | 3.01 | 0.44 | 0.286 | -- | -- | -- | 0.000248 | 2.98 | -- | -- | -- | -- |
| 280.58 | 0.78 | 3 | 0.451 | -- | 1.83 | -- | -- | 0.0523 | -- | 20.06 | 86 | 2.83 | 2.26 |
| 283.98 | 0.785 | 3.01 | -- | 0.182 | 1.74 | -- | -- | -0.0027 | 1.68 | 20.01 | 77 | 2.82 | 2.43 |
| 302.41 | 0.813 | 3.01 | 0.453 | -- | -- | -- | -- | 0.00765 | -- | -- | -- | -- | -- |
| 302.83 | 0.814 | 3.02 | -- | 0.294 | -- | -- | -- | -0.0488 | 2.99 | -- | -- | -- | -- |
| 285.95 | 0.788 | 3.01 | -- | -- | 1.84 | -- | -- | 0.00238 | -- | 20.03 | 76 | 2.8 | 2.47 |
| 307.81 | 0.819 | 3.02 | -- | -- | -- | -- | -- | -0.0426 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 260.28 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 4 | 263.24 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 7 | 264.03 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 79 | 268.91 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 2 |
| 86 | 269.22 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 16 |
| 87 | 269.23 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 14 |
| 169 | 271.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 5 |
| 172 | 271.75 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 2 |
| 193 | 272.47 | temperature | 20.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 237 | 273.62 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 2 |
| 238 | 273.64 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 7 |
| 280 | 274.42 | wind | 3.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 303 | 274.79 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 2 |
| 339 | 275.25 | wind | 1.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 344 | 275.35 | temperature | 20.0 | 90 | < th | dose independent | sin | 5 | NA |
| 441 | 276.31 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 2 |
| 442 | 276.31 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 2 |
| 459 | 276.59 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 22 |
| 476 | 276.94 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 477 | 276.95 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 2 |
| 478 | 277.00 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 12 |
| 502 | 277.16 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 2 |
| 520 | 277.34 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 524 | 277.38 | temperature | 20.0 | 90 | > th | dose independent | sin | 5 | NA |
| 525 | 277.41 | wind | 1.0 | 90 | > th | dose independent | rect. | 2 | 13 |
| 537 | 277.54 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 2 |
| 540 | 277.54 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 2 |
| 544 | 277.54 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 2 |
| 546 | 277.54 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 2 |
| 551 | 277.54 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 22 |
| 553 | 277.54 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 2 |
| 565 | 277.66 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 22 |
| 586 | 277.90 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 17 |
| 606 | 278.23 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 22 |
| 607 | 278.23 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 22 |
| 890 | 280.93 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 5 |
| 917 | 280.98 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 22 |
| 955 | 281.12 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 16 |
| 959 | 281.14 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 960 | 281.14 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 973 | 281.30 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 978 | 281.40 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 983 | 281.43 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 5 |