Os11g0148800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, FYVE/PHD-type domain containing protein.
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Os11g0148800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, FYVE/PHD-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.73 | 0.311 | 9.31 | -0.887 | 1.07 | -1.16 | 0.747 | -1.96 | 0.0953 | 1.87 | 25.03 | 10 | -- | -- |
| 48.65 | 0.327 | 9.35 | -1.19 | 1.08 | -0.993 | 0.0756 | -- | 0.0165 | 1.88 | 26.02 | 14 | -- | -- |
| 45.14 | 0.315 | 9.32 | -0.99 | 1.05 | -1.12 | -- | -1.42 | 0.0818 | 1.77 | 24.79 | 5 | -- | -- |
| 48.61 | 0.327 | 9.35 | -1.19 | 1.05 | -0.995 | -- | -- | 0.0254 | 1.82 | 25.37 | 5 | -- | -- |
| 102.94 | 0.475 | 9.29 | -0.857 | -- | -0.361 | -- | -0.919 | 0.223 | -- | 24.79 | 5 | -- | -- |
| 63.52 | 0.374 | 9.3 | -0.957 | 0.838 | -- | 0.0515 | -- | 0.23 | 1.93 | -- | -- | -- | -- |
| 63.53 | 0.373 | 9.3 | -0.958 | 0.838 | -- | -- | -- | 0.23 | 1.92 | -- | -- | -- | -- |
| 89.98 | 0.442 | 9.34 | -1.21 | -- | -1 | -- | -- | 0.0328 | -- | 27.7 | 986 | -- | -- |
| 82.69 | 0.426 | 9.3 | -- | 0.937 | -0.553 | -- | -- | 0.237 | 1.83 | 25.37 | 5 | -- | -- |
| 105.95 | 0.481 | 9.29 | -0.924 | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
| 87.74 | 0.438 | 9.28 | -- | 0.82 | -- | -- | -- | 0.337 | 1.89 | -- | -- | -- | -- |
| 124.27 | 0.519 | 9.29 | -- | -- | -0.474 | -- | -- | 0.261 | -- | 28.17 | 969 | -- | -- |
| 128.45 | 0.529 | 9.27 | -- | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.27 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 77 | 43.74 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 80 | 43.75 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 82 | 43.78 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 83 | 43.78 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 86 | 43.80 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 92 | 43.83 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 96 | 43.84 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 97 | 43.84 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 103 | 43.91 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 106 | 44.00 | temperature | 25.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 120 | 44.17 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 409 | 47.09 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 438 | 47.39 | temperature | 10.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 476 | 47.71 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 483 | 47.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 507 | 47.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 532 | 48.16 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 581 | 48.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 609 | 48.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 617 | 48.59 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 636 | 48.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 653 | 48.72 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 677 | 48.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 679 | 48.82 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 704 | 48.95 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 706 | 48.96 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 712 | 48.98 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 717 | 49.00 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 733 | 49.05 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 777 | 49.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 779 | 49.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 783 | 49.26 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 956 | 49.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |