Os11g0148000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sodium/calcium exchanger membrane region domain containing protein.
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Os11g0148000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sodium/calcium exchanger membrane region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.92 | 0.458 | 7.94 | 0.458 | 0.688 | -1.19 | 0.0977 | -0.329 | 0.0802 | 21.4 | 24.38 | 109 | -- | -- |
| 95.08 | 0.454 | 7.95 | 0.416 | 0.69 | -1.14 | 0.0508 | -- | 0.0746 | 21.4 | 24.42 | 107 | -- | -- |
| 94.96 | 0.454 | 7.94 | 0.453 | 0.689 | -1.19 | -- | -0.317 | 0.0802 | 21.4 | 24.36 | 109 | -- | -- |
| 95.08 | 0.454 | 7.95 | 0.412 | 0.686 | -1.14 | -- | -- | 0.0688 | 21.4 | 24.48 | 107 | -- | -- |
| 117.13 | 0.504 | 7.92 | 0.532 | -- | -1.1 | -- | -0.637 | 0.0612 | -- | 26.08 | 353 | -- | -- |
| 113.4 | 0.499 | 7.9 | 0.684 | 0.638 | -- | -0.103 | -- | 0.271 | 20.4 | -- | -- | -- | -- |
| 113.43 | 0.499 | 7.9 | 0.687 | 0.638 | -- | -- | -- | 0.271 | 20.4 | -- | -- | -- | -- |
| 117.64 | 0.505 | 7.94 | 0.413 | -- | -1.06 | -- | -- | 0.0359 | -- | 26.3 | 364 | -- | -- |
| 99.27 | 0.464 | 7.95 | -- | 0.672 | -1.22 | -- | -- | 0.0181 | 21.6 | 24.66 | 108 | -- | -- |
| 136.08 | 0.545 | 7.88 | 0.683 | -- | -- | -- | -- | 0.264 | -- | -- | -- | -- | -- |
| 125.86 | 0.525 | 7.92 | -- | 0.635 | -- | -- | -- | 0.194 | 20.5 | -- | -- | -- | -- |
| 121.74 | 0.514 | 7.95 | -- | -- | -1.22 | -- | -- | -0.0379 | -- | 26.1 | 343 | -- | -- |
| 148.4 | 0.569 | 7.9 | -- | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.14 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 2 | 79.33 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 8 | 81.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 14 | 82.68 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 15 | 82.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 32 | 84.12 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 40 | 84.83 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 41 | 84.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 48 | 85.42 | radiation | 30.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 58 | 85.99 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 65 | 86.58 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 8 |
| 79 | 87.06 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 99 | 87.66 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 106 | 87.86 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 123 | 88.54 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 139 | 88.65 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 142 | 88.70 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 143 | 88.73 | humidity | 60.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 146 | 88.77 | radiation | 1.0 | 90 | < th | dose independent | sin | 10 | NA |
| 154 | 88.98 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 11 | 18 |
| 156 | 89.07 | humidity | 70.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 157 | 89.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 158 | 89.08 | radiation | 20.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 160 | 89.12 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 167 | 89.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 168 | 89.33 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 169 | 89.33 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 175 | 89.41 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 4 |
| 176 | 89.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 2 |
| 177 | 89.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 179 | 89.47 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 186 | 89.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 188 | 89.55 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 189 | 89.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 191 | 89.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 2 |
| 192 | 89.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 2 |
| 199 | 89.65 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 6 |
| 205 | 89.77 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 218 | 89.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 221 | 89.98 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 231 | 90.05 | radiation | 1.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 246 | 90.21 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 4 |
| 247 | 90.21 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 254 | 90.25 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 261 | 90.34 | wind | 7.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 263 | 90.36 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 266 | 90.36 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 267 | 90.36 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 275 | 90.45 | humidity | 60.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 276 | 90.45 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 280 | 90.50 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 282 | 90.52 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 285 | 90.53 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 287 | 90.57 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 310 | 90.70 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 4 |
| 321 | 90.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 22 |
| 322 | 90.78 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 2 |
| 330 | 90.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 22 |
| 355 | 91.05 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 360 | 91.07 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 16 |
| 362 | 91.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 22 |
| 363 | 91.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 380 | 91.22 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 6 |
| 382 | 91.25 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 18 |
| 402 | 91.32 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 5 |
| 406 | 91.35 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 424 | 91.45 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 432 | 91.51 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 20 |
| 433 | 91.51 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 436 | 91.52 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 464 | 91.72 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 5 |
| 467 | 91.72 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 468 | 91.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 472 | 91.76 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 5 |
| 476 | 91.76 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 496 | 91.85 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 499 | 91.88 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 501 | 91.88 | wind | 9.0 | 10 | < th | dose independent | rect. | 11 | 19 |
| 530 | 92.01 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 3 |
| 532 | 92.01 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 544 | 92.05 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 561 | 92.10 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 563 | 92.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 565 | 92.10 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 566 | 92.10 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 570 | 92.10 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 582 | 92.12 | wind | 9.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 592 | 92.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 597 | 92.19 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 8 |
| 606 | 92.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 609 | 92.23 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 610 | 92.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 629 | 92.32 | wind | 9.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 636 | 92.36 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 16 |
| 650 | 92.38 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 665 | 92.46 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 672 | 92.49 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 676 | 92.52 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 19 |
| 677 | 92.52 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 683 | 92.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 686 | 92.57 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 687 | 92.57 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 692 | 92.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 699 | 92.59 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 6 |
| 711 | 92.65 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 746 | 92.78 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 778 | 92.86 | humidity | 80.0 | 90 | > th | dose independent | rect. | 20 | 9 |
| 786 | 92.92 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 791 | 92.93 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 852 | 93.23 | wind | 5.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 877 | 93.33 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 21 |
| 879 | 93.33 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 950 | 93.51 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 979 | 93.64 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 996 | 93.71 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 11 | 3 |