Os11g0146300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0146300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 241.75 | 0.731 | 6.62 | -4.19 | 0.904 | -1.41 | 1.57 | 4.26 | -1.37 | 1.8 | 29.78 | 1265 | -- | -- |
| 245.51 | 0.73 | 6.55 | -3.3 | 0.911 | -0.971 | 1.66 | -- | -1.32 | 2.09 | 29.5 | 1268 | -- | -- |
| 251.24 | 0.738 | 6.62 | -4.21 | 0.906 | -1.42 | -- | 4.1 | -1.37 | 1.68 | 29.8 | 1264 | -- | -- |
| 253.3 | 0.741 | 6.55 | -3.3 | 0.903 | -0.978 | -- | -- | -1.35 | 1.62 | 29.57 | 1268 | -- | -- |
| 296.97 | 0.803 | 6.62 | -4.12 | -- | -1.54 | -- | 3.34 | -1.47 | -- | 29.56 | 1229 | -- | -- |
| 288.58 | 0.796 | 6.52 | -2.95 | 1.06 | -- | 1.72 | -- | -1.32 | 1.71 | -- | -- | -- | -- |
| 300.15 | 0.811 | 6.53 | -3.01 | 1.06 | -- | -- | -- | -1.33 | 1.6 | -- | -- | -- | -- |
| 298.82 | 0.805 | 6.57 | -3.36 | -- | -1.2 | -- | -- | -1.45 | -- | 29.3 | 1221 | -- | -- |
| 528.79 | 1.07 | 6.47 | -- | 0.909 | -0.497 | -- | -- | -1.04 | 1.48 | 29.4 | 1230 | -- | -- |
| 368.49 | 0.897 | 6.52 | -2.97 | -- | -- | -- | -- | -1.31 | -- | -- | -- | -- | -- |
| 538.63 | 1.09 | 6.46 | -- | 1 | -- | -- | -- | -0.997 | 1.5 | -- | -- | -- | -- |
| 575.51 | 1.12 | 6.44 | -- | -- | 0.649 | -- | -- | -0.954 | -- | 29.3 | 1221 | -- | -- |
| 600.47 | 1.14 | 6.44 | -- | -- | -- | -- | -- | -0.98 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.81 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 10 | 243.82 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 11 | 243.92 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 13 | 244.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 14 | 244.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 16 | 244.22 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 17 | 244.24 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 25 | 244.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 29 | 244.40 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 31 | 244.42 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 49 | 244.47 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 53 | 244.48 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 95 | 244.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 123 | 244.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 125 | 244.69 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 188 | 244.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 208 | 244.86 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 211 | 244.87 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 307 | 244.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 310 | 244.90 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 325 | 244.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 330 | 244.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 342 | 244.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 343 | 244.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 363 | 245.03 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 412 | 245.12 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 434 | 245.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 452 | 245.28 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 467 | 245.28 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 510 | 245.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 18 |
| 574 | 245.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 595 | 245.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 596 | 245.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 603 | 245.66 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 608 | 245.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 633 | 245.75 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 643 | 245.79 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 646 | 245.82 | radiation | 1 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 652 | 245.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 665 | 245.89 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 672 | 245.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 718 | 245.96 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 722 | 245.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 730 | 245.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 814 | 246.02 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 901 | 246.25 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 956 | 246.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 959 | 246.37 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |