Os11g0145400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-like protein 5.
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Os11g0145400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-like protein 5.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.27 | 0.326 | 15.4 | -0.687 | 0.284 | 0.972 | 0.646 | -0.852 | -0.0793 | 12.1 | 21.8 | 1772 | -- | -- |
| 49.93 | 0.329 | 15.4 | -0.45 | 0.286 | 1.03 | 0.622 | -- | -0.0244 | 11.9 | 21.66 | 1772 | -- | -- |
| 49.9 | 0.329 | 15.4 | -0.662 | 0.304 | 0.951 | -- | -0.935 | -0.0925 | 12 | 21.9 | 1950 | -- | -- |
| 51.71 | 0.335 | 15.4 | -0.437 | 0.279 | 1.04 | -- | -- | -0.026 | 12.2 | 21.7 | 1760 | -- | -- |
| 54.96 | 0.345 | 15.4 | -0.626 | -- | 0.933 | -- | -0.845 | -0.0777 | -- | 22.05 | 1725 | -- | -- |
| 82.25 | 0.425 | 15.3 | 0.00799 | 0.271 | -- | 0.701 | -- | 0.292 | 12.3 | -- | -- | -- | -- |
| 84.36 | 0.43 | 15.3 | 0.0356 | 0.269 | -- | -- | -- | 0.296 | 12.5 | -- | -- | -- | -- |
| 56.5 | 0.35 | 15.4 | -0.427 | -- | 1.03 | -- | -- | -0.019 | -- | 21.69 | 1719 | -- | -- |
| 54.98 | 0.345 | 15.3 | -- | 0.297 | 0.912 | -- | -- | 0.0128 | 13 | 22.1 | 1484 | -- | -- |
| 88.9 | 0.441 | 15.3 | 0.0262 | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
| 84.39 | 0.43 | 15.3 | -- | 0.269 | -- | -- | -- | 0.292 | 12.5 | -- | -- | -- | -- |
| 59.77 | 0.36 | 15.3 | -- | -- | 0.861 | -- | -- | 0.045 | -- | 22.05 | 1715 | -- | -- |
| 88.92 | 0.44 | 15.3 | -- | -- | -- | -- | -- | 0.288 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 28 | 49.35 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 81 | 49.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 22 |
| 92 | 50.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 95 | 50.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 96 | 50.04 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 100 | 50.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 104 | 50.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 114 | 50.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 133 | 50.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 136 | 50.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 172 | 50.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 473 | 51.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 484 | 51.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 516 | 51.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 526 | 51.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 637 | 52.19 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 808 | 52.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 836 | 52.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 875 | 52.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 901 | 52.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 922 | 52.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 932 | 52.68 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 954 | 52.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 971 | 52.74 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 19 |