Os11g0140600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Annexin, type VII family protein.
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Os11g0140600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Annexin, type VII family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.95 | 0.215 | 13.5 | 0.863 | 1.53 | -0.97 | -0.0521 | 1.91 | 0.247 | 16.4 | 9.907 | 1276 | -- | -- |
| 23.82 | 0.227 | 13.5 | 0.685 | 1.59 | -0.971 | -0.22 | -- | 0.261 | 16.4 | 9.206 | 9091 | -- | -- |
| 20.91 | 0.213 | 13.5 | 0.857 | 1.53 | -0.986 | -- | 1.93 | 0.245 | 16.5 | 10.12 | 1188 | -- | -- |
| 23.95 | 0.228 | 13.5 | 0.681 | 1.59 | -0.97 | -- | -- | 0.259 | 16.4 | 9.191 | 9090 | -- | -- |
| 142.55 | 0.556 | 13.4 | 0.889 | -- | -1.39 | -- | 1.79 | 0.274 | -- | 11.26 | 1194 | -- | -- |
| 38.76 | 0.292 | 13.5 | 0.161 | 1.6 | -- | -0.195 | -- | -0.0313 | 16.3 | -- | -- | -- | -- |
| 38.86 | 0.292 | 13.5 | 0.159 | 1.6 | -- | -- | -- | -0.0324 | 16.3 | -- | -- | -- | -- |
| 145.09 | 0.561 | 13.5 | 0.51 | -- | -1.36 | -- | -- | 0.169 | -- | 9.877 | 1202 | -- | -- |
| 31.97 | 0.265 | 13.5 | -- | 1.8 | -0.844 | -- | -- | 0.0499 | 16.1 | 8.242 | 8349 | -- | -- |
| 176.55 | 0.621 | 13.5 | 0.0957 | -- | -- | -- | -- | -0.0748 | -- | -- | -- | -- | -- |
| 39.53 | 0.294 | 13.6 | -- | 1.6 | -- | -- | -- | -0.0501 | 16.3 | -- | -- | -- | -- |
| 151.1 | 0.572 | 13.5 | -- | -- | -1.15 | -- | -- | 0.0812 | -- | 6.333 | 1198 | -- | -- |
| 176.79 | 0.621 | 13.5 | -- | -- | -- | -- | -- | -0.0854 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 4 | 20.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 62 | 20.95 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 123 | 21.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 225 | 21.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 285 | 21.23 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 291 | 21.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 305 | 21.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 20 |
| 310 | 21.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 318 | 21.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 334 | 21.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 355 | 21.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 533 | 21.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 542 | 21.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 17 |
| 546 | 21.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 579 | 21.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 611 | 21.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 630 | 21.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 6 |
| 728 | 21.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 792 | 21.77 | temperature | 30 | 1440 | < th | dose dependent | sin | 1 | NA |
| 896 | 21.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 956 | 21.93 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |