Os11g0138600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphoglycerate mutase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0138600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Phosphoglycerate mutase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.93 | 0.527 | 8.32 | -0.442 | 1.41 | -1.86 | 0.318 | -0.38 | 0.211 | 10.4 | 18.35 | 269 | -- | -- |
| 126.05 | 0.523 | 8.32 | -0.377 | 1.4 | -1.86 | 0.307 | -- | 0.231 | 10.4 | 18.52 | 276 | -- | -- |
| 126.31 | 0.523 | 8.32 | -0.414 | 1.4 | -1.88 | -- | -0.329 | 0.216 | 10.4 | 18.1 | 277 | -- | -- |
| 126.4 | 0.524 | 8.32 | -0.367 | 1.4 | -1.87 | -- | -- | 0.228 | 10.4 | 18.4 | 277 | -- | -- |
| 184.89 | 0.633 | 8.38 | -0.294 | -- | -2.25 | -- | -0.0893 | 0.0694 | -- | 24.4 | 689 | -- | -- |
| 179.43 | 0.628 | 8.38 | -0.822 | 1.61 | -- | 0.399 | -- | -0.0869 | 8.78 | -- | -- | -- | -- |
| 179.96 | 0.628 | 8.38 | -0.809 | 1.61 | -- | -- | -- | -0.0869 | 8.77 | -- | -- | -- | -- |
| 184.28 | 0.632 | 8.37 | -0.335 | -- | -2.24 | -- | -- | 0.14 | -- | 24.4 | 683 | -- | -- |
| 129.43 | 0.53 | 8.31 | -- | 1.41 | -2.03 | -- | -- | 0.288 | 10.6 | 17.98 | 276 | -- | -- |
| 326.63 | 0.844 | 8.42 | -0.807 | -- | -- | -- | -- | -0.0743 | -- | -- | -- | -- | -- |
| 197.21 | 0.657 | 8.36 | -- | 1.61 | -- | -- | -- | 0.00324 | 8.81 | -- | -- | -- | -- |
| 187.05 | 0.637 | 8.36 | -- | -- | -2.3 | -- | -- | 0.19 | -- | 24.3 | 687 | -- | -- |
| 343.8 | 0.865 | 8.4 | -- | -- | -- | -- | -- | 0.0152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 4 | 118.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 52 | 123.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 101 | 126.32 | temperature | 10 | 30 | > th | dose dependent | sin | 18 | NA |
| 105 | 126.43 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 144 | 127.51 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 214 | 128.79 | temperature | 30 | 30 | < th | dose dependent | sin | 19 | NA |
| 221 | 128.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 17 |
| 319 | 130.10 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 17 |
| 322 | 130.12 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 21 |
| 324 | 130.13 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 19 |
| 329 | 130.15 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 15 |
| 344 | 130.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 638 | 132.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 713 | 133.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 15 |
| 714 | 133.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 719 | 133.29 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |