Os11g0137300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os11g0137300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.06 | 0.525 | 5.97 | 1.78 | 0.22 | 0.918 | 0.921 | -0.303 | 0.649 | 9.83 | 0.77 | 4179 | -- | -- |
| 125.14 | 0.521 | 5.97 | 1.75 | 0.195 | 0.998 | 0.88 | -- | 0.653 | 9.78 | 0.79 | 4172 | -- | -- |
| 127.96 | 0.527 | 5.97 | 1.76 | 0.223 | 0.951 | -- | 0.029 | 0.651 | 9.84 | 0.7787 | 4178 | -- | -- |
| 127.79 | 0.527 | 5.97 | 1.76 | 0.197 | 0.98 | -- | -- | 0.644 | 10.6 | 0.8199 | 4172 | -- | -- |
| 128.96 | 0.529 | 5.99 | 1.73 | -- | 1.15 | -- | 0.116 | 0.635 | -- | 0.8103 | 4115 | -- | -- |
| 139.68 | 0.554 | 6.01 | 1.47 | 0.421 | -- | 0.862 | -- | 0.464 | 10.3 | -- | -- | -- | -- |
| 142.62 | 0.559 | 6.01 | 1.51 | 0.415 | -- | -- | -- | 0.467 | 10.6 | -- | -- | -- | -- |
| 129.11 | 0.529 | 5.98 | 1.76 | -- | 1.16 | -- | -- | 0.647 | -- | 0.8111 | 4115 | -- | -- |
| 191.51 | 0.645 | 5.99 | -- | 0.346 | 0.936 | -- | -- | 0.511 | 10.5 | 8 | 7041 | -- | -- |
| 153.21 | 0.578 | 6.02 | 1.5 | -- | -- | -- | -- | 0.465 | -- | -- | -- | -- | -- |
| 202.43 | 0.666 | 6.05 | -- | 0.406 | -- | -- | -- | 0.299 | 10.3 | -- | -- | -- | -- |
| 195.32 | 0.651 | 6 | -- | -- | 0.896 | -- | -- | 0.536 | -- | 7.997 | 9822 | -- | -- |
| 212.48 | 0.68 | 6.06 | -- | -- | -- | -- | -- | 0.299 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.91 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 5 | 117.61 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 6 | 117.64 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 10 | 117.74 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 15 | 118.09 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 17 | 118.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 18 | 118.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 19 | 118.31 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 28 | 118.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 31 | 118.48 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 36 | 118.56 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 44 | 118.67 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 46 | 118.67 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 47 | 118.69 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 48 | 118.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 51 | 118.69 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 55 | 118.69 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 64 | 118.69 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 65 | 118.69 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 85 | 118.69 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 104 | 118.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 106 | 118.73 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 107 | 118.73 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 111 | 118.73 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 113 | 118.73 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 118 | 118.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 119 | 118.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 121 | 118.73 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 126 | 118.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 129 | 118.74 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 160 | 118.80 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 177 | 119.21 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 179 | 119.41 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 181 | 119.46 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 185 | 119.80 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 230 | 123.50 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 12 |
| 232 | 123.52 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 270 | 123.86 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 15 |
| 281 | 124.31 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 283 | 124.50 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 292 | 124.56 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 299 | 124.60 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 308 | 124.84 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 313 | 124.93 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 328 | 125.05 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 17 | 15 |
| 336 | 125.16 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 338 | 125.19 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 355 | 125.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 357 | 125.42 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 363 | 125.50 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 366 | 125.57 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 17 | 19 |
| 383 | 125.73 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 394 | 125.93 | radiation | 1.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 428 | 126.20 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 435 | 126.28 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 441 | 126.33 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 449 | 126.36 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 450 | 126.37 | radiation | 1.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 451 | 126.37 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 453 | 126.37 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 457 | 126.41 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 12 |
| 475 | 126.47 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 480 | 126.51 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 493 | 126.59 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 502 | 126.60 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 514 | 126.66 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 516 | 126.66 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 20 |
| 519 | 126.66 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 17 | 16 |
| 531 | 126.67 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 17 |
| 534 | 126.67 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 23 |
| 535 | 126.68 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 13 |
| 537 | 126.68 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 569 | 126.76 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 574 | 126.77 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 17 | 19 |
| 578 | 126.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 618 | 126.86 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 641 | 126.90 | wind | 7.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 643 | 126.91 | wind | 7.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 653 | 126.93 | wind | 7.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 654 | 126.93 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 8 |
| 660 | 126.94 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 10 | 23 |
| 664 | 126.95 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 11 |
| 704 | 127.02 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 711 | 127.03 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 13 |
| 748 | 127.08 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 22 |
| 755 | 127.09 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 19 |
| 765 | 127.10 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 4 | 15 |
| 776 | 127.11 | radiation | 1.0 | 4320 | < th | dose independent | no | NA | NA |
| 784 | 127.11 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 21 |
| 793 | 127.11 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 23 |
| 798 | 127.12 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 1 | 18 |
| 896 | 127.23 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 917 | 127.25 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 10 | 23 |
| 928 | 127.27 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 947 | 127.29 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 959 | 127.30 | wind | 7.0 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 963 | 127.30 | wind | 1.0 | 30 | < th | dose dependent | rect. | 11 | 16 |
| 968 | 127.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 22 |
| 970 | 127.31 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 992 | 127.33 | wind | 7.0 | 43200 | > th | dose independent | rect. | 22 | 23 |