Os11g0137200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pyruvate carboxyltransferase domain containing protein.
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Os11g0137200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pyruvate carboxyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.47 | 0.424 | 10.8 | -0.732 | 2.56 | -1.85 | 1.78 | -0.195 | -0.048 | 7.53 | 16.85 | 230 | -- | -- |
| 81.47 | 0.42 | 10.8 | -0.703 | 2.56 | -1.82 | 1.8 | -- | -0.039 | 7.53 | 17.3 | 231 | -- | -- |
| 89.65 | 0.441 | 10.8 | -0.804 | 2.53 | -1.81 | -- | -0.881 | -0.076 | 7.48 | 17.3 | 260 | -- | -- |
| 90.27 | 0.443 | 10.8 | -0.651 | 2.53 | -1.84 | -- | -- | -0.0337 | 7.5 | 17.5 | 252 | -- | -- |
| 302.17 | 0.81 | 10.9 | -0.481 | -- | -3.21 | -- | -0.456 | 0.067 | -- | 24.3 | 466 | -- | -- |
| 125.37 | 0.525 | 10.8 | -1.13 | 3 | -- | 2.15 | -- | -0.328 | 6.97 | -- | -- | -- | -- |
| 137.39 | 0.549 | 10.8 | -1.09 | 3.01 | -- | -- | -- | -0.334 | 6.94 | -- | -- | -- | -- |
| 298.95 | 0.805 | 10.8 | -0.424 | -- | -3.3 | -- | -- | 0.0435 | -- | 24.3 | 498 | -- | -- |
| 100.32 | 0.466 | 10.7 | -- | 2.46 | -2.24 | -- | -- | 0.0553 | 7.6 | 16.05 | 250 | -- | -- |
| 613.55 | 1.16 | 10.9 | -1.02 | -- | -- | -- | -- | -0.277 | -- | -- | -- | -- | -- |
| 168.51 | 0.607 | 10.8 | -- | 3 | -- | -- | -- | -0.213 | 6.97 | -- | -- | -- | -- |
| 303.55 | 0.811 | 10.8 | -- | -- | -3.37 | -- | -- | 0.101 | -- | 24.3 | 499 | -- | -- |
| 641.21 | 1.18 | 10.9 | -- | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 2 | 79.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 4 | 79.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 15 | 80.53 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 17 | 80.90 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 18 | 81.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 19 | 81.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 21 | 81.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 42 | 81.94 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 43 | 81.94 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 132 | 84.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 172 | 84.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 356 | 86.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 12 |
| 403 | 87.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 467 | 87.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 494 | 87.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 498 | 87.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 594 | 88.29 | temperature | 10 | 720 | > th | dose dependent | sin | 2 | NA |
| 618 | 88.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 627 | 88.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 701 | 88.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 703 | 88.73 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 739 | 88.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 7 |
| 740 | 88.84 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 799 | 89.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 888 | 89.22 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 889 | 89.22 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 896 | 89.24 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 16 |
| 905 | 89.26 | temperature | 20 | 1440 | > th | dose independent | sin | 14 | NA |
| 908 | 89.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 909 | 89.27 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |