Os11g0136400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily MFS_1 protein.
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Os11g0136400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily MFS_1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 289.53 | 0.799 | 6.65 | -1.68 | 3.99 | 2.99 | -0.283 | 1.94 | 0.402 | 12.9 | 98.88 | 843 | 17.5 | 5.2 |
| 289.05 | 0.792 | 6.68 | -1.8 | 4.49 | 3.63 | -1.31 | -- | 0.367 | 13.4 | 103.3 | 828 | 17.6 | 5.67 |
| 286.28 | 0.788 | 6.64 | -1.63 | 4.07 | 3.08 | -- | 2.15 | 0.401 | 13 | 101.5 | 832 | 17.5 | 5.8 |
| 292.16 | 0.796 | 6.63 | -1.91 | 5.48 | 4.68 | -- | -- | 0.487 | 13.5 | 113.4 | 827 | 16.9 | 6.93 |
| 653.41 | 1.2 | 6.71 | -2.1 | -- | -1.84 | -- | 0.384 | 0.332 | -- | 128.9 | 1233 | 19 | 6.01 |
| 440.08 | 0.983 | 6.64 | -1.97 | 2.41 | -- | -0.527 | -- | 0.392 | 10.9 | -- | -- | -- | -- |
| 441.24 | 0.984 | 6.64 | -2 | 2.41 | -- | -- | -- | 0.39 | 10.9 | -- | -- | -- | -- |
| 630.53 | 1.17 | 6.41 | -2.55 | -- | -2.96 | -- | -- | 1.19 | -- | 139.9 | 6074 | 20.6 | 4.16 |
| 381.3 | 0.909 | 6.63 | -- | 5.48 | 4.72 | -- | -- | 0.599 | 13.6 | 112.4 | 827 | 17.2 | 6.9 |
| 802.16 | 1.32 | 6.7 | -2.05 | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
| 546.2 | 1.09 | 6.59 | -- | 2.43 | -- | -- | -- | 0.613 | 11 | -- | -- | -- | -- |
| 573.92 | 1.12 | 6.55 | -- | -- | -2.55 | -- | -- | 0.712 | -- | 556.2 | 6623 | 12.6 | 5.18 |
| 912.73 | 1.41 | 6.65 | -- | -- | -- | -- | -- | 0.601 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 309.32 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 3 | 311.67 | humidity | 90 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 11 | 318.20 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 22 | 323.97 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 2 |
| 34 | 326.55 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 58 | 330.12 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 84 | 334.03 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 91 | 335.02 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 11 |
| 95 | 335.30 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 132 | 338.64 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 194 | 342.10 | humidity | 90 | 720 | < th | dose dependent | sin | 13 | NA |
| 199 | 342.53 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 4 |
| 208 | 343.37 | humidity | 80 | 720 | > th | dose independent | rect. | 16 | 6 |
| 238 | 345.32 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 239 | 345.38 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 10 |
| 264 | 346.88 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 268 | 346.93 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 1 |
| 273 | 347.22 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 11 |
| 282 | 347.52 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 309 | 348.07 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 317 | 348.13 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 337 | 348.75 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 338 | 348.75 | radiation | 10 | 1440 | < th | dose dependent | sin | 17 | NA |
| 341 | 348.80 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 16 |
| 346 | 348.81 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 353 | 348.85 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 418 | 349.68 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 428 | 349.81 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 439 | 350.05 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 17 |
| 451 | 350.19 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 457 | 350.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 468 | 350.37 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 472 | 350.41 | humidity | 80 | 720 | > th | dose independent | sin | 17 | NA |
| 479 | 350.45 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 493 | 350.53 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 496 | 350.56 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 506 | 350.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 524 | 350.74 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 606 | 351.35 | humidity | 80 | 720 | < th | dose independent | sin | 16 | NA |
| 674 | 351.95 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 705 | 352.09 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 821 | 352.82 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 943 | 353.36 | radiation | 1 | 1440 | < th | dose independent | sin | 19 | NA |
| 956 | 353.42 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 20 |