Os11g0132400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF872, eukaryotic family protein.
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Os11g0132400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF872, eukaryotic family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.81 | 0.348 | 8.77 | -1.38 | 0.377 | -2.55 | 0.518 | -2.46 | -0.148 | 12 | 23.7 | 1446 | -- | -- |
| 59.53 | 0.359 | 8.82 | -1.74 | 0.38 | -2.09 | 0.473 | -- | -0.257 | 12 | 25.38 | 1442 | -- | -- |
| 55.94 | 0.348 | 8.76 | -1.37 | 0.371 | -2.57 | -- | -2.46 | -0.144 | 11.8 | 23.6 | 1461 | -- | -- |
| 60.51 | 0.362 | 8.82 | -1.72 | 0.385 | -2.09 | -- | -- | -0.254 | 11.9 | 25.36 | 1426 | -- | -- |
| 63.86 | 0.372 | 8.77 | -1.4 | -- | -2.55 | -- | -2.38 | -0.147 | -- | 23.54 | 1595 | -- | -- |
| 118.96 | 0.511 | 8.72 | -1.1 | 0.34 | -- | 0.423 | -- | 0.193 | 11.5 | -- | -- | -- | -- |
| 119.71 | 0.512 | 8.72 | -1.09 | 0.339 | -- | -- | -- | 0.194 | 11.2 | -- | -- | -- | -- |
| 68.44 | 0.385 | 8.83 | -1.74 | -- | -2.08 | -- | -- | -0.251 | -- | 25.08 | 1602 | -- | -- |
| 120.32 | 0.511 | 8.73 | -- | 0.529 | -1.58 | -- | -- | 0.119 | 7.89 | 37.02 | 351 | -- | -- |
| 126.9 | 0.526 | 8.73 | -1.09 | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
| 150.75 | 0.574 | 8.69 | -- | 0.35 | -- | -- | -- | 0.315 | 11.4 | -- | -- | -- | -- |
| 125.1 | 0.523 | 8.75 | -- | -- | -1.33 | -- | -- | 0.0884 | -- | 25.08 | 1602 | -- | -- |
| 158.44 | 0.588 | 8.7 | -- | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 24 | 54.22 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 110 | 55.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 11 |
| 122 | 55.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 166 | 55.56 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 181 | 55.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 208 | 55.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 231 | 55.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 232 | 55.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 359 | 56.30 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 528 | 57.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 561 | 57.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 566 | 57.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 567 | 57.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 691 | 57.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 735 | 58.10 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 771 | 58.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 782 | 58.31 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 889 | 58.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 9 |
| 891 | 58.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 969 | 59.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 975 | 59.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 976 | 59.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |