Os11g0131100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : VQ domain containing protein.
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Os11g0131100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : VQ domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.44 | 0.434 | 13.3 | 1.14 | 0.805 | -1.51 | 0.345 | -0.414 | 0.0493 | 8.24 | 21.41 | 2604 | -- | -- |
| 83.28 | 0.425 | 13.3 | 1.06 | 0.827 | -1.31 | 0.574 | -- | 0.0616 | 8.28 | 22.2 | 1928 | -- | -- |
| 81.65 | 0.421 | 13.3 | 0.903 | 0.829 | -1.31 | -- | -0.293 | 0.0329 | 8.57 | 22.1 | 1477 | -- | -- |
| 81.8 | 0.421 | 13.3 | 0.985 | 0.846 | -1.31 | -- | -- | 0.056 | 8.52 | 22.21 | 1451 | -- | -- |
| 110.02 | 0.489 | 13.3 | 0.883 | -- | -1.27 | -- | -0.161 | 0.0392 | -- | 22.3 | 809 | -- | -- |
| 145.53 | 0.566 | 13.4 | 0.507 | 0.843 | -- | 0.272 | -- | -0.385 | 8.73 | -- | -- | -- | -- |
| 145.76 | 0.565 | 13.4 | 0.516 | 0.841 | -- | -- | -- | -0.384 | 8.8 | -- | -- | -- | -- |
| 110.11 | 0.489 | 13.3 | 0.934 | -- | -1.28 | -- | -- | 0.05 | -- | 22.3 | 812 | -- | -- |
| 104.27 | 0.476 | 13.4 | -- | 0.839 | -1.08 | -- | -- | -0.113 | 8.36 | 22.3 | 1383 | -- | -- |
| 185.92 | 0.637 | 13.4 | 0.517 | -- | -- | -- | -- | -0.378 | -- | -- | -- | -- | -- |
| 152.79 | 0.578 | 13.4 | -- | 0.842 | -- | -- | -- | -0.442 | 8.76 | -- | -- | -- | -- |
| 131.19 | 0.533 | 13.4 | -- | -- | -1.1 | -- | -- | -0.0965 | -- | 22.37 | 793 | -- | -- |
| 192.98 | 0.648 | 13.5 | -- | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 2 | 84.03 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 84.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 5 | 84.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 6 | 84.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 11 | 84.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 89 | 84.81 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 140 | 85.21 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 243 | 86.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 278 | 86.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 289 | 86.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 316 | 86.85 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 409 | 87.46 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 536 | 88.27 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 568 | 88.40 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 576 | 88.44 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 584 | 88.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 647 | 88.72 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 683 | 88.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 876 | 89.56 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 884 | 89.58 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |