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Os11g0124500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF607 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.81 (0.0275) R2 : 0.791
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.14 (0.0811) R2dC : 0.92 R2C : 0.167
β3 : 2.58 (0.0822) R2dE : 0.608 R2E : -0.13
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.244 (0.0578) R2dN8 : 0.0113 R2N8 : 0.00507
σ : 0.515
deviance : 122.48
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C
peak time of C : 19.9
E
wheather : radiation
threshold : 0.24
memory length : 371
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 2.02
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.43 0.511 9.82 -0.273 2.97 2.15 0.651 1.06 0.22 20.6 0.2403 345 0.64 --
120.66 0.512 9.81 -0.311 2.93 2.17 0.561 -- 0.233 20.5 0.3656 348 1.27 --
118.54 0.507 9.82 -0.321 3.01 2.4 -- 0.675 0.189 20.1 0.4137 356 1.95 --
120 0.51 9.82 -0.315 3.06 2.52 -- -- 0.21 19.9 0.3098 361 2.22 --
227.28 0.706 9.71 -0.338 -- 2.07 -- 0.702 0.298 -- 4.253 17 6.53 --
154.18 0.582 9.79 -0.348 2.59 -- 0.925 -- 0.228 23.2 -- -- -- --
157.83 0.588 9.79 -0.386 2.59 -- -- -- 0.225 23.2 -- -- -- --
158.16 0.588 9.73 -0.384 -- 2.59 -- -- 0.228 -- 1172 7 6.88 --
122.48 0.515 9.81 -- 3.14 2.58 -- -- 0.244 19.9 0.24 371 2.02 --
576.56 1.12 9.72 -0.324 -- -- -- -- 0.248 -- -- -- -- --
161.75 0.595 9.78 -- 2.59 -- -- -- 0.268 23.2 -- -- -- --
161.88 0.595 9.72 -- -- 2.58 -- -- 0.269 -- 2618 4 6.86 --
579.32 1.12 9.72 -- -- -- -- -- 0.284 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.75 wind 7.0 270 < th dose independent rect. 5 19
2 114.29 temperature 10.0 270 > th dose dependent rect. 5 6
3 114.42 temperature 10.0 270 > th dose dependent rect. 4 8
5 114.92 precipitation 0.1 270 < th dose independent rect. 5 19
6 114.92 precipitation 0.1 270 < th dose dependent rect. 5 19
9 115.46 wind 7.0 270 < th dose independent rect. 16 8
11 115.59 radiation 1.0 270 < th dose dependent rect. 24 6
12 115.66 precipitation 0.1 270 < th dose independent rect. 3 22
13 115.66 precipitation 0.1 270 < th dose dependent rect. 3 22
15 115.80 radiation 1.0 270 < th dose dependent rect. 24 9
17 115.88 wind 7.0 270 < th dose independent rect. 4 21
19 115.89 precipitation 0.1 270 < th dose independent rect. 6 17
20 115.89 precipitation 0.1 270 < th dose dependent rect. 6 17
21 115.91 radiation 1.0 270 < th dose dependent rect. 24 18
30 116.17 radiation 1.0 270 < th dose independent rect. 24 6
41 116.97 radiation 1.0 270 < th dose independent rect. 24 9
44 117.03 radiation 1.0 270 < th dose dependent rect. 23 20
47 117.07 atmosphere 1010.0 270 < th dose independent rect. 24 5
54 117.08 temperature 10.0 270 > th dose independent rect. 24 5
56 117.08 temperature 30.0 270 < th dose independent rect. 24 5
57 117.08 humidity 50.0 270 > th dose independent rect. 24 5
60 117.08 atmosphere 995.0 270 > th dose independent rect. 24 5
64 117.08 temperature 10.0 270 > th dose independent rect. 5 19
65 117.10 wind 9.0 270 < th dose independent rect. 24 5
66 117.12 precipitation 0.1 270 < th dose independent rect. 16 8
67 117.12 precipitation 0.1 270 < th dose dependent rect. 16 8
88 117.64 radiation 1.0 270 < th dose independent rect. 24 18
107 117.91 wind 9.0 270 < th dose dependent rect. 16 8
146 118.57 precipitation 0.1 270 < th dose independent rect. 24 5
147 118.57 precipitation 0.1 270 < th dose dependent rect. 24 5
151 118.65 humidity 50.0 270 > th dose dependent rect. 24 5
155 118.72 atmosphere 995.0 270 > th dose independent rect. 24 17
163 118.81 temperature 10.0 10 > th dose dependent rect. 6 9
171 118.95 atmosphere 1015.0 270 < th dose independent rect. 24 17
173 118.96 temperature 10.0 270 > th dose independent rect. 17 7
174 118.96 radiation 20.0 270 < th dose independent rect. 17 7
177 118.96 temperature 10.0 270 > th dose independent rect. 24 17
179 118.97 humidity 60.0 270 > th dose independent rect. 19 16
182 119.14 humidity 50.0 270 > th dose independent rect. 24 18
185 119.22 wind 9.0 270 < th dose dependent rect. 5 19
187 119.29 temperature 10.0 270 > th dose independent rect. 1 3
189 119.29 temperature 30.0 270 < th dose independent rect. 1 3
190 119.29 humidity 50.0 270 > th dose independent rect. 1 3
193 119.29 atmosphere 995.0 270 > th dose independent rect. 1 3
194 119.29 atmosphere 1010.0 270 < th dose independent rect. 1 3
196 119.29 radiation 1.0 270 < th dose independent rect. 1 3
201 119.29 temperature 10.0 270 > th dose independent rect. 4 21
202 119.29 radiation 1.0 270 < th dose dependent rect. 1 3
209 119.32 wind 9.0 270 < th dose independent rect. 1 3
218 119.37 precipitation 0.1 270 < th dose independent rect. 4 9
220 119.37 precipitation 0.1 270 < th dose dependent rect. 4 9
221 119.38 humidity 50.0 270 > th dose independent rect. 4 9
236 119.54 wind 1.0 270 > th dose independent rect. 24 5
237 119.56 humidity 50.0 270 > th dose independent rect. 13 16
241 119.65 wind 9.0 270 < th dose independent rect. 4 9
243 119.69 wind 1.0 270 > th dose independent rect. 17 7
249 119.78 precipitation 0.1 270 < th dose independent rect. 19 15
250 119.78 precipitation 0.1 270 < th dose dependent rect. 19 15
257 119.87 temperature 10.0 270 > th dose independent rect. 4 9
258 119.87 atmosphere 995.0 270 > th dose independent rect. 4 9
259 119.87 atmosphere 1015.0 270 < th dose independent rect. 4 9
260 119.87 temperature 10.0 270 > th dose independent rect. 13 15
262 119.90 radiation 40.0 270 < th dose independent rect. 19 16
263 119.93 radiation 40.0 270 < th dose dependent rect. 17 7
264 119.94 radiation 1.0 270 < th dose dependent sin 6 NA
269 120.01 temperature 10.0 90 > th dose dependent rect. 6 19
271 120.02 wind 7.0 270 < th dose independent rect. 19 16
306 120.22 humidity 50.0 270 > th dose dependent rect. 1 3
335 120.46 temperature 10.0 270 > th dose dependent rect. 24 5
336 120.47 wind 9.0 270 < th dose independent rect. 24 17
346 120.55 humidity 50.0 270 > th dose independent rect. 18 6
389 120.75 precipitation 0.1 270 < th dose independent rect. 1 3
390 120.75 wind 1.0 270 > th dose independent rect. 5 19
391 120.75 precipitation 0.1 270 < th dose dependent rect. 1 3
426 120.93 atmosphere 995.0 270 > th dose independent rect. 17 7
474 121.19 atmosphere 995.0 270 > th dose independent rect. 13 15
476 121.21 temperature 20.0 270 > th dose independent rect. 5 6
487 121.29 radiation 40.0 90 < th dose independent rect. 13 17
495 121.35 precipitation 0.1 270 < th dose independent rect. 24 17
496 121.35 precipitation 0.1 270 < th dose dependent rect. 24 17
500 121.38 radiation 10.0 43200 < th dose dependent rect. 20 7
503 121.41 radiation 10.0 43200 < th dose dependent rect. 22 5
513 121.45 radiation 10.0 30 < th dose dependent rect. 2 16
549 121.80 temperature 10.0 270 > th dose dependent rect. 1 3
551 121.81 temperature 30.0 10 < th dose dependent rect. 2 17
567 121.95 radiation 1.0 90 > th dose independent sin 3 NA
569 121.95 temperature 10.0 10 > th dose dependent rect. 6 20
581 122.03 atmosphere 995.0 270 > th dose dependent rect. 24 5
583 122.04 radiation 40.0 10 < th dose dependent rect. 2 4
587 122.07 radiation 1.0 90 < th dose independent sin 3 NA
593 122.11 temperature 10.0 270 > th dose independent rect. 11 8
594 122.11 atmosphere 1015.0 270 < th dose independent rect. 11 8
595 122.11 temperature 10.0 270 > th dose independent rect. 19 16
596 122.11 atmosphere 995.0 270 > th dose independent rect. 19 16
626 122.19 wind 9.0 270 < th dose dependent rect. 24 5
629 122.21 wind 9.0 10 < th dose independent rect. 2 4
630 122.21 temperature 10.0 10 > th dose independent rect. 2 4
632 122.21 temperature 30.0 10 < th dose independent rect. 2 4
633 122.21 humidity 50.0 10 > th dose independent rect. 2 4
636 122.21 atmosphere 995.0 10 > th dose independent rect. 2 4
637 122.21 atmosphere 1010.0 10 < th dose independent rect. 2 4
639 122.21 radiation 20.0 10 < th dose independent rect. 2 4
644 122.21 temperature 10.0 10 > th dose independent rect. 6 20
646 122.22 atmosphere 995.0 270 > th dose independent rect. 11 8
658 122.25 wind 9.0 270 < th dose independent rect. 13 15
673 122.34 radiation 1.0 90 < th dose dependent sin 2 NA
686 122.41 atmosphere 995.0 270 > th dose independent rect. 5 19
715 122.46 radiation 1.0 270 < th dose independent sin 7 NA
738 122.50 humidity 50.0 10 > th dose dependent rect. 2 4
783 122.67 radiation 40.0 270 < th dose independent rect. 6 18
787 122.70 wind 9.0 1440 < th dose independent rect. 3 4
788 122.70 temperature 10.0 1440 > th dose independent rect. 3 4
791 122.70 temperature 30.0 1440 < th dose independent rect. 3 4
795 122.70 humidity 50.0 1440 > th dose independent rect. 3 4
800 122.70 atmosphere 995.0 1440 > th dose independent rect. 3 4
801 122.70 radiation 40.0 1440 < th dose independent rect. 3 4
806 122.70 temperature 10.0 1440 > th dose independent rect. 7 20
856 122.86 radiation 40.0 270 < th dose independent rect. 5 7
860 122.90 radiation 1.0 270 > th dose independent sin 7 NA
921 123.12 radiation 1.0 90 > th dose independent rect. 18 20
922 123.12 atmosphere 995.0 270 > th dose dependent rect. 1 3
941 123.17 wind 9.0 270 < th dose dependent rect. 1 3
955 123.22 temperature 20.0 10 > th dose independent rect. 6 9
974 123.33 atmosphere 1015.0 270 < th dose independent rect. 13 16
987 123.38 temperature 30.0 270 < th dose independent rect. 19 15