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Os11g0123400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytidylyltransferase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.84 (0.019) R2 : 0.418
β1 : -0.759 (0.0697) R2dD : 0.157 R2D : 0.131
β2 : 0.624 (0.0451) R2dC : 0.245 R2C : 0.245
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.205 (0.0406) R2dN8 : 0.0437 R2N8 : 0.00811
σ : 0.358
deviance : 58.36
__
_____
C
peak time of C : 12.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.87 0.3 9.84 -0.688 0.618 1.16 -1 1.58 -0.0853 12.1 0.8492 5775 -- --
40.25 0.295 9.81 -0.424 0.64 1.02 -0.934 -- -0.0286 12.2 1.062 8698 -- --
43.27 0.306 9.85 -0.685 0.672 1.22 -- 1.65 -0.108 12.2 0.1695 10171 -- --
44.4 0.31 9.81 -0.443 0.628 1.01 -- -- -0.029 12.3 1.102 8676 -- --
61.59 0.366 9.85 -0.601 -- 1.36 -- 1.4 -0.0567 -- 0.7624 11233 -- --
54.47 0.346 9.84 -0.723 0.62 -- -0.957 -- -0.202 12.1 -- -- -- --
58.36 0.358 9.84 -0.759 0.624 -- -- -- -0.205 12.4 -- -- -- --
61.42 0.365 9.79 -0.401 -- 1.15 -- -- 0.0407 -- 1.782 9759 -- --
45.1 0.313 9.79 -- 0.721 1.11 -- -- 0.0819 12.9 1.12 16249 -- --
82.88 0.425 9.85 -0.78 -- -- -- -- -0.215 -- -- -- -- --
73.57 0.401 9.82 -- 0.635 -- -- -- -0.121 12.4 -- -- -- --
65.77 0.378 9.79 -- -- 1.21 -- -- 0.0501 -- 0.83 11208 -- --
98.95 0.464 9.83 -- -- -- -- -- -0.129 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.97 humidity 90.0 14400 > th dose dependent rect. 23 9
4 36.08 humidity 90.0 14400 > th dose dependent rect. 24 1
8 36.18 humidity 90.0 14400 > th dose dependent rect. 4 3
10 36.26 humidity 90.0 14400 > th dose dependent rect. 2 6
16 36.33 humidity 90.0 14400 > th dose dependent rect. 23 4
50 36.68 humidity 90.0 14400 > th dose dependent sin 7 NA
135 37.75 radiation 1.0 14400 < th dose dependent rect. 6 2
151 37.84 wind 7.0 43200 > th dose independent rect. 9 3
160 37.92 wind 7.0 43200 < th dose independent rect. 9 3
162 37.93 radiation 1.0 14400 < th dose dependent rect. 18 14
179 38.01 precipitation 0.1 43200 < th dose independent rect. 6 1
180 38.01 radiation 1.0 14400 < th dose independent rect. 18 13
181 38.01 precipitation 0.1 43200 < th dose dependent rect. 6 1
183 38.03 radiation 1.0 14400 < th dose independent rect. 18 11
184 38.04 radiation 30.0 4320 < th dose independent rect. 16 16
189 38.06 radiation 1.0 14400 < th dose independent rect. 18 8
197 38.09 radiation 30.0 14400 > th dose independent rect. 16 16
206 38.13 radiation 1.0 14400 < th dose independent rect. 18 1
214 38.15 radiation 1.0 14400 > th dose independent rect. 18 1
224 38.16 radiation 1.0 14400 < th dose dependent rect. 24 8
233 38.17 temperature 10.0 270 > th dose dependent rect. 24 21
246 38.21 radiation 1.0 14400 < th dose dependent rect. 4 4
249 38.21 temperature 10.0 270 > th dose dependent rect. 1 18
260 38.24 radiation 1.0 4320 < th dose dependent rect. 18 17
265 38.25 temperature 30.0 720 < th dose dependent rect. 21 17
288 38.30 wind 7.0 43200 > th dose dependent rect. 10 2
294 38.32 wind 7.0 43200 > th dose independent rect. 5 7
298 38.33 humidity 90.0 14400 > th dose independent rect. 23 9
303 38.34 radiation 1.0 14400 > th dose independent rect. 18 14
309 38.36 precipitation 0.1 43200 > th dose independent rect. 6 1
310 38.36 humidity 90.0 14400 < th dose independent rect. 22 3
311 38.36 precipitation 0.1 43200 > th dose dependent rect. 6 1
320 38.38 radiation 1.0 14400 < th dose dependent rect. 18 8
321 38.38 radiation 1.0 14400 < th dose dependent rect. 18 10
331 38.42 radiation 1.0 14400 > th dose independent rect. 6 2
332 38.42 radiation 1.0 14400 < th dose independent rect. 6 2
341 38.43 wind 7.0 43200 < th dose independent rect. 5 7
348 38.44 radiation 40.0 4320 < th dose independent rect. 7 2
357 38.46 radiation 40.0 4320 < th dose independent rect. 18 15
382 38.49 radiation 1.0 14400 < th dose dependent rect. 18 3
392 38.50 radiation 1.0 14400 < th dose dependent rect. 18 1
396 38.51 radiation 1.0 14400 < th dose dependent sin 9 NA
421 38.55 humidity 90.0 43200 < th dose independent rect. 6 3
435 38.57 radiation 40.0 4320 < th dose independent rect. 24 9
471 38.62 radiation 30.0 14400 > th dose independent rect. 7 1
509 38.63 temperature 30.0 270 < th dose dependent rect. 5 20
526 38.65 radiation 1.0 14400 < th dose independent rect. 6 9
540 38.66 radiation 1.0 14400 < th dose independent rect. 18 20
541 38.66 temperature 30.0 720 < th dose dependent sin 7 NA
542 38.66 temperature 30.0 720 < th dose dependent rect. 4 5
555 38.68 radiation 1.0 14400 > th dose independent rect. 6 9
556 38.68 radiation 1.0 14400 < th dose independent rect. 18 18
558 38.68 radiation 1.0 14400 < th dose dependent rect. 6 6
621 38.74 humidity 80.0 43200 > th dose independent rect. 10 1
634 38.76 humidity 90.0 43200 > th dose independent rect. 6 2
660 38.81 humidity 90.0 14400 > th dose independent rect. 22 6
675 38.84 radiation 1.0 14400 > th dose independent rect. 18 20
707 38.88 wind 7.0 43200 > th dose independent rect. 24 12
710 38.88 wind 7.0 43200 > th dose dependent rect. 9 5
713 38.89 humidity 90.0 43200 < th dose independent rect. 5 10
730 38.91 humidity 90.0 14400 > th dose dependent no NA NA
738 38.92 temperature 30.0 270 < th dose dependent rect. 5 9
756 38.94 radiation 30.0 4320 > th dose dependent rect. 16 17
760 38.95 temperature 10.0 720 > th dose dependent rect. 18 18
762 38.96 wind 7.0 43200 < th dose independent rect. 5 3
782 38.99 humidity 80.0 43200 > th dose dependent rect. 8 3
824 39.05 radiation 30.0 4320 > th dose dependent rect. 7 2
845 39.05 radiation 1.0 14400 < th dose dependent rect. 10 22
846 39.06 humidity 90.0 14400 > th dose independent rect. 23 2
855 39.06 radiation 1.0 14400 < th dose dependent rect. 6 23
889 39.09 temperature 20.0 720 > th dose dependent rect. 20 17
898 39.11 temperature 15.0 43200 < th dose independent rect. 3 1
901 39.11 wind 7.0 43200 < th dose independent rect. 24 12
920 39.13 radiation 1.0 14400 < th dose dependent no NA NA
926 39.13 radiation 1.0 14400 < th dose dependent rect. 24 19
933 39.13 radiation 1.0 14400 < th dose dependent rect. 4 22
951 39.14 radiation 1.0 14400 < th dose dependent rect. 6 20
961 39.15 wind 7.0 43200 > th dose independent rect. 5 3
965 39.15 humidity 90.0 14400 < th dose independent rect. 22 10
969 39.15 radiation 1.0 14400 < th dose dependent rect. 4 15
992 39.16 temperature 15.0 43200 > th dose independent rect. 5 1