Os11g0118800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Expressed protein-like protein.
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Os11g0118800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Expressed protein-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.42 | 0.295 | 10.1 | -1.18 | 0.564 | 1.06 | -0.249 | -3.34 | 0.395 | 8.45 | 26.3 | 1202 | -- | -- |
| 42.11 | 0.302 | 9.98 | -0.426 | 0.581 | 0.736 | -0.131 | -- | 0.591 | 8.26 | 26.45 | 1186 | -- | -- |
| 39.58 | 0.293 | 10.1 | -1.19 | 0.556 | 1.05 | -- | -3.36 | 0.406 | 8.34 | 26.48 | 1218 | -- | -- |
| 42 | 0.302 | 9.98 | -0.412 | 0.564 | 0.726 | -- | -- | 0.562 | 8.36 | 26.29 | 1179 | -- | -- |
| 55.19 | 0.346 | 10.1 | -1.07 | -- | 0.909 | -- | -2.63 | 0.412 | -- | 26.24 | 1327 | -- | -- |
| 61.05 | 0.366 | 9.98 | -0.194 | 0.513 | -- | -0.0735 | -- | 0.589 | 7.49 | -- | -- | -- | -- |
| 61.06 | 0.366 | 9.98 | -0.196 | 0.513 | -- | -- | -- | 0.589 | 7.46 | -- | -- | -- | -- |
| 56.92 | 0.351 | 10 | -0.377 | -- | 0.73 | -- | -- | 0.45 | -- | 23.72 | 1353 | -- | -- |
| 45.96 | 0.316 | 9.96 | -- | 0.544 | 0.61 | -- | -- | 0.657 | 8.28 | 27.69 | 1172 | -- | -- |
| 75.1 | 0.405 | 9.99 | -0.188 | -- | -- | -- | -- | 0.597 | -- | -- | -- | -- | -- |
| 62.07 | 0.369 | 9.97 | -- | 0.511 | -- | -- | -- | 0.61 | 7.48 | -- | -- | -- | -- |
| 61.01 | 0.364 | 9.99 | -- | -- | 0.562 | -- | -- | 0.622 | -- | 26.6 | 1311 | -- | -- |
| 76.03 | 0.407 | 9.99 | -- | -- | -- | -- | -- | 0.618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.65 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 4 | 39.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 5 | 40.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 29 | 40.50 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 39 | 40.61 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 46 | 40.74 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 49 | 40.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 18 |
| 75 | 40.88 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 126 | 41.14 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 130 | 41.15 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 10 |
| 165 | 41.29 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 10 |
| 245 | 41.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 251 | 41.62 | wind | 7 | 43200 | < th | dose independent | sin | 22 | NA |
| 287 | 41.69 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 350 | 41.79 | wind | 7 | 43200 | > th | dose independent | sin | 21 | NA |
| 368 | 41.81 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 388 | 41.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 417 | 41.90 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 457 | 41.99 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 504 | 42.11 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 512 | 42.13 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 18 |
| 513 | 42.13 | wind | 5 | 43200 | > th | dose dependent | sin | 21 | NA |
| 560 | 42.24 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 590 | 42.30 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 18 |
| 608 | 42.35 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 609 | 42.35 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 625 | 42.38 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 654 | 42.43 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 751 | 42.64 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 802 | 42.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 854 | 42.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 895 | 42.88 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 922 | 42.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 923 | 42.89 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 6 |
| 928 | 42.89 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 931 | 42.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 975 | 42.96 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 4 |