Os11g0114200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0114200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.46 | 0.669 | 4.61 | -10.7 | 0.293 | 86 | -1.08 | -837 | -0.286 | 23.7 | 69.9 | 31 | 19 | 1 |
| 247.29 | 0.738 | 3.63 | -0.73 | 0.354 | -0.475 | -1.01 | -- | -0.318 | 23.2 | 69.9 | 31 | 19 | 1 |
| 206.95 | 0.67 | 4.6 | -10.6 | 0.308 | 86 | -- | -836 | -0.283 | 0.795 | 69.9 | 32 | 19 | 1 |
| 210.84 | 0.681 | 3.62 | -0.714 | 0.319 | 6.51 | -- | -- | -0.294 | 0.242 | 71.01 | 34 | 20 | 1.53 |
| 212.86 | 0.68 | 4.59 | -10.5 | -- | 85.7 | -- | -833 | -0.276 | -- | 69.95 | 32 | 19 | 1 |
| 248.38 | 0.739 | 3.62 | -0.738 | 0.343 | -- | -1.03 | -- | -0.312 | 23.3 | -- | -- | -- | -- |
| 252.88 | 0.745 | 3.62 | -0.697 | 0.348 | -- | -- | -- | -0.309 | 23.6 | -- | -- | -- | -- |
| 173.18 | 0.613 | 3.61 | -0.731 | -- | 7.36 | -- | -- | -0.269 | -- | 72.27 | 37 | 20 | 1.87 |
| 181.35 | 0.627 | 3.6 | -- | 0.276 | 7.08 | -- | -- | -0.195 | 23.9 | 72 | 30 | 19.9 | 1.76 |
| 260.49 | 0.754 | 3.61 | -0.687 | -- | -- | -- | -- | -0.305 | -- | -- | -- | -- | -- |
| 265.67 | 0.762 | 3.6 | -- | 0.34 | -- | -- | -- | -0.232 | 23.5 | -- | -- | -- | -- |
| 183.79 | 0.631 | 3.59 | -- | -- | 7.03 | -- | -- | -0.187 | -- | 72.07 | 29 | 19.9 | 2.18 |
| 272.95 | 0.771 | 3.6 | -- | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.66 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 13 | 204.76 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 74 | 210.76 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 88 | 211.28 | temperature | 30.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 174 | 226.45 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 175 | 226.45 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 211 | 227.06 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 212 | 227.11 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 230 | 228.20 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 10 | 7 |
| 234 | 228.63 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 266 | 229.95 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 334 | 233.05 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 9 |
| 361 | 234.15 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 7 |
| 374 | 234.23 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 425 | 234.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 1 |
| 433 | 235.07 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 8 |
| 436 | 235.12 | wind | 3.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 438 | 235.15 | temperature | 25.0 | 720 | > th | dose independent | rect. | 12 | 3 |
| 449 | 235.30 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 456 | 235.49 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 3 |
| 467 | 235.68 | temperature | 25.0 | 30 | < th | dose independent | rect. | 15 | 14 |
| 475 | 235.83 | temperature | 20.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 494 | 236.13 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 506 | 236.27 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 2 |
| 517 | 236.40 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 14 |
| 518 | 236.41 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 519 | 236.42 | temperature | 15.0 | 90 | > th | dose independent | rect. | 20 | 23 |
| 544 | 236.53 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 7 |
| 586 | 236.75 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 4 |
| 604 | 236.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 6 |
| 628 | 236.99 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 10 |
| 685 | 237.30 | wind | 5.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 687 | 237.32 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 14 |
| 724 | 237.55 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 761 | 237.69 | wind | 1.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 762 | 237.70 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 783 | 237.81 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 796 | 237.88 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 5 |
| 831 | 238.03 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 7 |
| 847 | 238.10 | wind | 9.0 | 90 | < th | dose independent | rect. | 20 | 23 |
| 861 | 238.17 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 863 | 238.17 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 864 | 238.17 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 867 | 238.17 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 869 | 238.17 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 875 | 238.17 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 911 | 238.30 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 956 | 238.47 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 11 | 14 |
| 965 | 238.52 | humidity | 80.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 995 | 238.62 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 1 |
| 996 | 238.62 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 997 | 238.62 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 999 | 238.64 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 23 |