Os11g0113300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0113300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.95 | 0.311 | 10.6 | -0.214 | 1.06 | -0.237 | -0.249 | -0.0935 | -0.207 | 2.39 | 1006 | 191 | -- | -- |
| 43.96 | 0.309 | 10.6 | -0.214 | 1.06 | -0.24 | -0.249 | -- | -0.202 | 2.39 | 1006 | 218 | -- | -- |
| 44.15 | 0.309 | 10.6 | -0.208 | 1.06 | -0.24 | -- | -0.0769 | -0.206 | 2.39 | 1006 | 218 | -- | -- |
| 44.18 | 0.31 | 10.6 | -0.206 | 1.06 | -0.244 | -- | -- | -0.2 | 2.39 | 1006 | 218 | -- | -- |
| 102.52 | 0.472 | 10.6 | -0.206 | -- | -0.343 | -- | 0.286 | -0.103 | -- | 1007 | 545 | -- | -- |
| 48.52 | 0.327 | 10.7 | -0.21 | 1.03 | -- | -0.301 | -- | -0.309 | 2.2 | -- | -- | -- | -- |
| 48.86 | 0.327 | 10.7 | -0.202 | 1.03 | -- | -- | -- | -0.308 | 2.19 | -- | -- | -- | -- |
| 102.2 | 0.471 | 10.6 | -0.148 | -- | -0.39 | -- | -- | -0.0126 | -- | 1007 | 579 | -- | -- |
| 45.3 | 0.313 | 10.6 | -- | 1.06 | -0.243 | -- | -- | -0.178 | 2.39 | 1006 | 218 | -- | -- |
| 111.62 | 0.494 | 10.6 | -0.159 | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
| 49.93 | 0.331 | 10.6 | -- | 1.02 | -- | -- | -- | -0.285 | 2.19 | -- | -- | -- | -- |
| 102.81 | 0.472 | 10.6 | -- | -- | -0.403 | -- | -- | 0.00398 | -- | 1007 | 577 | -- | -- |
| 112.29 | 0.495 | 10.6 | -- | -- | -- | -- | -- | -0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.95 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 2 | 43.00 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 3 | 43.03 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 11 | 43.42 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 14 | 43.46 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 32 | 43.49 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 33 | 43.49 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 40 | 43.64 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 41 | 43.64 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 48 | 43.69 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 56 | 43.78 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 58 | 43.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 60 | 43.79 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 82 | 43.81 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 15 | NA |
| 85 | 43.83 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 90 | 43.87 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 93 | 43.89 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 21 |
| 105 | 43.95 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 106 | 43.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 123 | 44.01 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 129 | 44.04 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 132 | 44.05 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 137 | 44.05 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 141 | 44.06 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 143 | 44.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 144 | 44.07 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 146 | 44.08 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 148 | 44.08 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 160 | 44.10 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 5 |
| 161 | 44.11 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 164 | 44.11 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 171 | 44.12 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 196 | 44.17 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 256 | 44.28 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 290 | 44.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 292 | 44.33 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 296 | 44.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 301 | 44.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 306 | 44.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 309 | 44.36 | atmosphere | 1005.0 | 270 | < th | dose independent | sin | 14 | NA |
| 310 | 44.36 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 325 | 44.37 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 333 | 44.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 334 | 44.39 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 339 | 44.39 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 19 | 23 |
| 375 | 44.44 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 22 | 1 |
| 379 | 44.44 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 382 | 44.44 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 385 | 44.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 388 | 44.44 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 13 | 14 |
| 396 | 44.45 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 2 |
| 412 | 44.48 | atmosphere | 1005.0 | 270 | > th | dose independent | no | NA | NA |
| 415 | 44.48 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 424 | 44.48 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 9 | 23 |
| 429 | 44.49 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 11 | 23 |
| 437 | 44.50 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 456 | 44.52 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 457 | 44.52 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 459 | 44.53 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 5 |
| 466 | 44.53 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 21 |
| 469 | 44.54 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 18 |
| 472 | 44.54 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 482 | 44.55 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 495 | 44.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 504 | 44.57 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 515 | 44.58 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 1 | 21 |
| 526 | 44.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 550 | 44.60 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 557 | 44.61 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 564 | 44.61 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 591 | 44.62 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 594 | 44.62 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 23 |
| 625 | 44.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 626 | 44.65 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 641 | 44.66 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 652 | 44.66 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 9 |
| 698 | 44.69 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 719 | 44.70 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 12 | 20 |
| 727 | 44.70 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 728 | 44.70 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 11 | 18 |
| 737 | 44.71 | atmosphere | 1010.0 | 90 | < th | dose dependent | sin | 14 | NA |
| 748 | 44.72 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 785 | 44.73 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 787 | 44.73 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 16 |
| 789 | 44.74 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 790 | 44.74 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 809 | 44.75 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 829 | 44.75 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 851 | 44.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 861 | 44.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 19 |
| 877 | 44.78 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 892 | 44.78 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 894 | 44.79 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 912 | 44.79 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 920 | 44.79 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 6 | 17 |
| 924 | 44.80 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 925 | 44.80 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 926 | 44.80 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 928 | 44.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 930 | 44.80 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 21 |
| 941 | 44.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 981 | 44.81 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 10 |
| 985 | 44.81 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 7 | 16 |
| 999 | 44.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |