Os11g0113200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0113200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.83 | 0.315 | 9.08 | 1.99 | 0.117 | -0.868 | -0.5 | 2.29 | 0.501 | 24 | 21.62 | 1790 | -- | -- |
| 47.3 | 0.32 | 9.13 | 1.59 | 0.125 | -0.891 | -0.478 | -- | 0.434 | 2.1 | 16.28 | 7506 | -- | -- |
| 45.79 | 0.315 | 9.07 | 2.06 | 0.118 | -0.878 | -- | 2.45 | 0.515 | 0.303 | 22.09 | 1715 | -- | -- |
| 47.99 | 0.323 | 9.13 | 1.58 | 0.141 | -0.901 | -- | -- | 0.429 | 2.46 | 15.98 | 7475 | -- | -- |
| 46.54 | 0.318 | 9.07 | 2.04 | -- | -0.865 | -- | 2.38 | 0.511 | -- | 22.24 | 1694 | -- | -- |
| 63.78 | 0.374 | 9.19 | 1.08 | 0.113 | -- | -0.492 | -- | 0.155 | 1.68 | -- | -- | -- | -- |
| 64.68 | 0.377 | 9.19 | 1.09 | 0.12 | -- | -- | -- | 0.157 | 2.79 | -- | -- | -- | -- |
| 48.79 | 0.325 | 9.14 | 1.41 | -- | -0.676 | -- | -- | 0.39 | -- | 22.49 | 7506 | -- | -- |
| 90.39 | 0.443 | 9.23 | -- | 0.191 | -0.398 | -- | -- | -0.0144 | 2.37 | 28.4 | 2401 | -- | -- |
| 65.52 | 0.378 | 9.19 | 1.1 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 96.16 | 0.459 | 9.22 | -- | 0.142 | -- | -- | -- | 0.0353 | 2.86 | -- | -- | -- | -- |
| 91.7 | 0.446 | 9.22 | -- | -- | -0.422 | -- | -- | 0.0174 | -- | 27.6 | 1940 | -- | -- |
| 97.32 | 0.46 | 9.22 | -- | -- | -- | -- | -- | 0.0383 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 11 | 42.21 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 12 | 42.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 13 | 42.23 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 15 | 42.23 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 17 | 42.24 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 23 | 42.71 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 24 | 42.78 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 25 | 42.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 26 | 43.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 27 | 43.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 28 | 43.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 30 | 43.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 37 | 43.51 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 39 | 43.51 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 43 | 43.59 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 46 | 43.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 49 | 43.80 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 50 | 43.83 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 53 | 43.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 64 | 44.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 98 | 44.48 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 106 | 44.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 7 | 14 |
| 113 | 44.65 | wind | 7 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 115 | 44.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 128 | 44.68 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 129 | 44.68 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 156 | 44.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 160 | 44.76 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 165 | 44.77 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 174 | 44.79 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 178 | 44.80 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 179 | 44.80 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 188 | 44.83 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 194 | 44.84 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 210 | 44.87 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 214 | 44.88 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 215 | 44.88 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 225 | 44.89 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 233 | 44.91 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 244 | 44.93 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 245 | 44.93 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 255 | 44.95 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 277 | 44.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 278 | 44.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 279 | 44.97 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 291 | 44.98 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 296 | 44.99 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 302 | 45.00 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 333 | 45.05 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 337 | 45.06 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 22 |
| 344 | 45.07 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 354 | 45.09 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 372 | 45.11 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 373 | 45.11 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 22 |
| 383 | 45.12 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 388 | 45.13 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 390 | 45.13 | wind | 5 | 43200 | < th | dose independent | sin | 0 | NA |
| 398 | 45.13 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 423 | 45.16 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 15 |
| 563 | 45.26 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 591 | 45.28 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 637 | 45.31 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 21 |
| 651 | 45.32 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 667 | 45.33 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 683 | 45.34 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 23 |
| 690 | 45.35 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 711 | 45.36 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 712 | 45.36 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 753 | 45.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 796 | 45.40 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 888 | 45.45 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 915 | 45.47 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 978 | 45.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 21 |