Os11g0113100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dual specificity protein phosphatase domain containing protein.
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Os11g0113100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dual specificity protein phosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.45 | 0.291 | 10.4 | -0.977 | 0.691 | -0.923 | 0.475 | -1.24 | -0.486 | 11.6 | 19.97 | 4492 | -- | -- |
| 39.62 | 0.293 | 10.4 | -1.14 | 0.713 | -0.878 | 0.518 | -- | -0.548 | 11.3 | 21.35 | 4524 | -- | -- |
| 39.32 | 0.292 | 10.4 | -0.976 | 0.683 | -0.924 | -- | -1.3 | -0.488 | 11.6 | 19.99 | 4539 | -- | -- |
| 40.6 | 0.297 | 10.4 | -1.13 | 0.709 | -0.859 | -- | -- | -0.545 | 11.6 | 21.57 | 4518 | -- | -- |
| 62.21 | 0.369 | 10.4 | -1.21 | -- | -0.582 | -- | -0.391 | -0.413 | -- | 19.7 | 4598 | -- | -- |
| 56.32 | 0.352 | 10.4 | -1.19 | 0.727 | -- | 0.494 | -- | -0.417 | 11.7 | -- | -- | -- | -- |
| 57.38 | 0.355 | 10.4 | -1.17 | 0.725 | -- | -- | -- | -0.415 | 11.7 | -- | -- | -- | -- |
| 62.99 | 0.371 | 10.4 | -1.27 | -- | -0.604 | -- | -- | -0.434 | -- | 20.15 | 4595 | -- | -- |
| 61.7 | 0.366 | 10.4 | -- | 0.761 | -0.743 | -- | -- | -0.48 | 11.4 | 29.98 | 25220 | -- | -- |
| 90.38 | 0.444 | 10.4 | -1.19 | -- | -- | -- | -- | -0.424 | -- | -- | -- | -- | -- |
| 93.42 | 0.452 | 10.4 | -- | 0.738 | -- | -- | -- | -0.285 | 11.8 | -- | -- | -- | -- |
| 95.51 | 0.455 | 10.4 | -- | -- | -0.809 | -- | -- | -0.438 | -- | 29.96 | 24786 | -- | -- |
| 127.73 | 0.528 | 10.4 | -- | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 2 | 36.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 7 | 36.10 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 8 | 36.11 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 15 | 36.44 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 29 | 36.92 | radiation | 10 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 30 | 37.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 31 | 37.09 | radiation | 10 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 32 | 37.11 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 63 | 37.32 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 126 | 37.90 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 132 | 37.96 | radiation | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 141 | 38.11 | radiation | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 148 | 38.19 | radiation | 10 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 154 | 38.29 | radiation | 20 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 162 | 38.39 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 174 | 38.58 | radiation | 20 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 179 | 38.64 | radiation | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 186 | 38.66 | radiation | 30 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 210 | 38.69 | radiation | 20 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 219 | 38.77 | radiation | 40 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 229 | 38.83 | radiation | 40 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 231 | 38.84 | radiation | 10 | 4320 | > th | dose dependent | rect. | 14 | 2 |
| 243 | 38.92 | radiation | 40 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 262 | 39.07 | radiation | 20 | 4320 | < th | dose independent | rect. | 8 | 12 |
| 269 | 39.08 | radiation | 40 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 270 | 39.08 | radiation | 20 | 4320 | < th | dose independent | rect. | 8 | 10 |
| 273 | 39.08 | radiation | 20 | 4320 | < th | dose independent | rect. | 8 | 18 |
| 274 | 39.08 | radiation | 20 | 4320 | < th | dose independent | rect. | 8 | 20 |
| 298 | 39.10 | radiation | 40 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 301 | 39.11 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 304 | 39.12 | temperature | 30 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 312 | 39.13 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 314 | 39.13 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 18 |
| 336 | 39.14 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 15 |
| 338 | 39.14 | radiation | 20 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 340 | 39.15 | radiation | 20 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 361 | 39.19 | radiation | 40 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 367 | 39.19 | radiation | 40 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 378 | 39.20 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 428 | 39.25 | radiation | 20 | 4320 | < th | dose independent | rect. | 4 | 16 |
| 449 | 39.26 | radiation | 20 | 4320 | < th | dose independent | no | NA | NA |
| 515 | 39.27 | radiation | 20 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 543 | 39.28 | radiation | 20 | 4320 | < th | dose independent | rect. | 11 | 23 |
| 562 | 39.30 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 601 | 39.31 | radiation | 20 | 4320 | < th | dose independent | rect. | 14 | 7 |
| 616 | 39.32 | radiation | 20 | 4320 | < th | dose independent | sin | 21 | NA |
| 621 | 39.32 | radiation | 20 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 642 | 39.34 | radiation | 20 | 4320 | < th | dose independent | rect. | 14 | 12 |
| 643 | 39.34 | radiation | 20 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 723 | 39.38 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 787 | 39.40 | radiation | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 804 | 39.42 | temperature | 30 | 4320 | < th | dose independent | sin | 7 | NA |
| 833 | 39.44 | radiation | 40 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 836 | 39.45 | radiation | 40 | 14400 | < th | dose independent | sin | 7 | NA |
| 853 | 39.47 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 955 | 39.54 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 1000 | 39.58 | radiation | 40 | 14400 | > th | dose independent | sin | 7 | NA |