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Os11g0112900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.97 (0.0177) R2 : 0.0596
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.2 (0.0372) R2dN8 : 0.0769 R2N8 : 0.0596
σ : 0.333
deviance : 50.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.75 0.277 8.98 0.623 0.102 -0.43 -0.603 -0.126 0.164 1.89 66.14 1888 -- --
34.77 0.275 8.98 0.627 0.0985 -0.433 -0.599 -- 0.166 1.76 66.58 1881 -- --
36 0.279 8.98 0.647 0.119 -0.444 -- -0.126 0.164 3.73 65.25 1869 -- --
36.01 0.279 8.97 0.648 0.122 -0.454 -- -- 0.165 3.72 65.29 1859 -- --
36.53 0.281 8.96 0.657 -- -0.452 -- 0.156 0.224 -- 75 1776 -- --
40.18 0.297 8.95 0.542 0.101 -- -0.647 -- 0.256 2.16 -- -- -- --
41.28 0.301 8.95 0.56 0.142 -- -- -- 0.259 4.87 -- -- -- --
36.56 0.282 8.96 0.645 -- -0.439 -- -- 0.222 -- 74.89 1779 -- --
44.65 0.311 8.95 -- 0.125 -0.592 -- -- 0.268 5.31 79 7381 -- --
42.35 0.304 8.95 0.565 -- -- -- -- 0.262 -- -- -- -- --
49.54 0.329 8.96 -- 0.152 -- -- -- 0.196 4.75 -- -- -- --
45.43 0.314 8.95 -- -- -0.587 -- -- 0.272 -- 78.85 7577 -- --
50.77 0.333 8.97 -- -- -- -- -- 0.2 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.25 radiation 1.0 43200 < th dose dependent rect. 24 2
2 34.52 wind 7.0 43200 > th dose dependent rect. 17 4
4 34.54 humidity 70.0 1440 > th dose independent rect. 17 1
5 34.57 wind 9.0 43200 < th dose independent rect. 17 4
6 34.59 wind 7.0 43200 > th dose independent rect. 17 4
8 34.59 precipitation 0.1 43200 > th dose dependent rect. 16 2
9 34.61 wind 7.0 43200 > th dose dependent rect. 15 6
10 34.64 precipitation 0.1 43200 > th dose dependent rect. 17 4
11 34.65 wind 7.0 43200 > th dose dependent rect. 14 17
16 34.69 wind 9.0 14400 > th dose dependent rect. 17 19
23 34.74 precipitation 0.1 4320 > th dose dependent rect. 12 7
25 34.74 precipitation 0.1 4320 > th dose dependent rect. 4 14
30 34.76 precipitation 0.1 14400 > th dose dependent rect. 17 6
34 34.77 wind 7.0 43200 > th dose dependent sin 14 NA
54 34.80 temperature 25.0 4320 > th dose independent rect. 5 1
66 34.82 wind 9.0 43200 > th dose independent sin 14 NA
67 34.82 wind 9.0 43200 < th dose independent sin 14 NA
71 34.83 radiation 1.0 43200 < th dose dependent rect. 22 4
76 34.84 wind 9.0 43200 > th dose independent rect. 17 13
90 34.86 wind 7.0 43200 > th dose independent rect. 13 18
92 34.86 radiation 1.0 43200 < th dose dependent rect. 19 7
100 34.88 wind 9.0 43200 < th dose independent rect. 17 13
107 34.89 humidity 70.0 1440 < th dose independent rect. 16 2
117 34.89 precipitation 0.1 4320 > th dose dependent rect. 22 20
123 34.90 wind 9.0 14400 > th dose dependent rect. 20 15
138 34.92 wind 7.0 43200 < th dose independent rect. 13 18
145 34.93 wind 5.0 14400 > th dose independent rect. 20 1
157 34.94 wind 7.0 43200 > th dose independent rect. 15 7
189 34.97 precipitation 0.1 4320 < th dose independent rect. 13 5
190 34.97 precipitation 0.1 4320 > th dose independent rect. 11 7
191 34.97 precipitation 0.1 4320 < th dose independent rect. 11 7
196 34.97 humidity 60.0 1440 > th dose dependent rect. 17 2
198 34.97 precipitation 0.1 4320 < th dose dependent rect. 13 5
200 34.97 precipitation 0.1 4320 < th dose dependent rect. 11 7
202 34.97 precipitation 0.1 4320 > th dose dependent rect. 2 16
232 35.00 wind 5.0 14400 < th dose independent rect. 20 1
233 35.00 wind 7.0 43200 > th dose independent rect. 13 9
239 35.00 temperature 30.0 720 > th dose independent rect. 15 21
252 35.01 humidity 60.0 720 > th dose independent rect. 11 20
254 35.01 wind 5.0 14400 > th dose dependent rect. 20 1
293 35.04 precipitation 0.1 14400 < th dose independent rect. 17 6
300 35.04 wind 7.0 43200 > th dose dependent rect. 17 1
302 35.04 precipitation 0.1 14400 < th dose dependent rect. 17 6
313 35.05 temperature 25.0 4320 < th dose independent rect. 5 1
322 35.05 wind 9.0 14400 > th dose independent rect. 17 18
324 35.05 temperature 30.0 720 < th dose independent rect. 21 22
329 35.06 precipitation 0.1 14400 > th dose independent rect. 17 6
351 35.07 humidity 70.0 1440 > th dose independent rect. 16 16
362 35.08 wind 7.0 43200 < th dose independent rect. 12 10
370 35.08 humidity 90.0 1440 < th dose dependent rect. 17 2
377 35.09 temperature 30.0 720 > th dose independent sin 10 NA
391 35.09 temperature 30.0 720 > th dose independent rect. 17 22
393 35.09 temperature 30.0 720 < th dose independent rect. 6 23
395 35.09 precipitation 0.1 43200 > th dose dependent rect. 20 1
402 35.10 atmosphere 1000.0 14400 < th dose independent rect. 10 1
418 35.11 atmosphere 1000.0 14400 > th dose independent rect. 10 1
419 35.11 precipitation 0.1 43200 < th dose independent rect. 17 1
423 35.11 precipitation 0.1 4320 < th dose independent rect. 16 2
438 35.11 precipitation 0.1 43200 < th dose dependent rect. 17 1
440 35.11 precipitation 0.1 4320 < th dose dependent rect. 16 2
451 35.12 humidity 70.0 1440 > th dose independent rect. 16 7
452 35.12 wind 9.0 43200 < th dose independent rect. 17 8
482 35.13 humidity 70.0 1440 > th dose independent rect. 16 12
486 35.13 wind 9.0 14400 < th dose independent rect. 18 17
500 35.14 temperature 30.0 720 < th dose independent no NA NA
501 35.14 humidity 60.0 4320 > th dose independent rect. 12 1
537 35.15 precipitation 0.1 4320 > th dose independent rect. 16 2
558 35.16 temperature 30.0 720 > th dose independent no NA NA
567 35.16 temperature 30.0 720 > th dose independent rect. 8 11
666 35.16 temperature 30.0 720 < th dose independent rect. 24 23
675 35.17 precipitation 0.1 43200 > th dose independent rect. 17 1
706 35.18 temperature 30.0 720 < th dose independent rect. 23 20
708 35.18 temperature 30.0 720 < th dose independent rect. 3 23
709 35.18 temperature 25.0 4320 > th dose dependent rect. 5 1
721 35.19 humidity 60.0 4320 < th dose independent rect. 12 1
743 35.19 temperature 30.0 720 < th dose independent rect. 9 23
745 35.19 humidity 80.0 1440 < th dose dependent rect. 15 4
762 35.20 temperature 30.0 90 < th dose independent rect. 5 11
766 35.20 temperature 30.0 720 > th dose independent rect. 11 23
830 35.22 humidity 70.0 1440 < th dose independent rect. 16 17
862 35.23 wind 9.0 14400 < th dose independent rect. 20 6
886 35.23 precipitation 0.1 14400 > th dose dependent rect. 8 15
912 35.24 atmosphere 1000.0 10 > th dose independent rect. 5 23
923 35.24 wind 9.0 14400 > th dose dependent rect. 20 8
929 35.24 precipitation 0.1 14400 > th dose dependent rect. 10 13
952 35.25 wind 7.0 43200 > th dose independent rect. 2 19
963 35.25 wind 9.0 14400 > th dose dependent rect. 20 6
975 35.26 temperature 30.0 720 > th dose independent sin 22 NA
986 35.26 wind 9.0 14400 > th dose independent rect. 20 8
994 35.26 wind 9.0 14400 > th dose independent rect. 20 15