Os11g0112800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Saposin B domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0112800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Saposin B domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.89 | 0.357 | 12.3 | -0.995 | 0.224 | 1.24 | 0.112 | -1.61 | -0.214 | 3.89 | 14.94 | 647 | -- | -- |
| 59.82 | 0.36 | 12.2 | -0.706 | 0.278 | 1.26 | 0.208 | -- | -0.14 | 3.96 | 13.63 | 584 | -- | -- |
| 57.76 | 0.354 | 12.3 | -1.02 | 0.276 | 1.21 | -- | -1.75 | -0.234 | 3.74 | 15.9 | 560 | -- | -- |
| 59.94 | 0.361 | 12.2 | -0.706 | 0.276 | 1.25 | -- | -- | -0.139 | 3.9 | 12.26 | 587 | -- | -- |
| 59.24 | 0.358 | 12.3 | -1.05 | -- | 1.12 | -- | -1.61 | -0.224 | -- | 16.12 | 890 | -- | -- |
| 78.49 | 0.415 | 12.2 | -0.406 | 0.268 | -- | 0.076 | -- | 0.0498 | 23 | -- | -- | -- | -- |
| 78.51 | 0.415 | 12.2 | -0.409 | 0.268 | -- | -- | -- | 0.0495 | 23 | -- | -- | -- | -- |
| 61.33 | 0.365 | 12.2 | -0.717 | -- | 1.17 | -- | -- | -0.133 | -- | 13.17 | 854 | -- | -- |
| 71.59 | 0.394 | 12.2 | -- | 0.252 | 0.933 | -- | -- | -0.0207 | 2.71 | 10.6 | 531 | -- | -- |
| 82.97 | 0.426 | 12.2 | -0.403 | -- | -- | -- | -- | 0.0515 | -- | -- | -- | -- | -- |
| 82.93 | 0.426 | 12.2 | -- | 0.264 | -- | -- | -- | 0.0951 | 22.9 | -- | -- | -- | -- |
| 73.31 | 0.399 | 12.2 | -- | -- | 0.891 | -- | -- | -0.0154 | -- | 11.4 | 775 | -- | -- |
| 87.26 | 0.436 | 12.2 | -- | -- | -- | -- | -- | 0.0963 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 7 | 56.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 8 | 56.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 20 | 57.18 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 23 | 57.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 29 | 57.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 60 | 57.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 15 |
| 72 | 57.59 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 91 | 57.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 176 | 57.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 201 | 58.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 217 | 58.07 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 254 | 58.17 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 331 | 58.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 411 | 58.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 472 | 58.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 642 | 58.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 767 | 59.13 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 785 | 59.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 941 | 59.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 988 | 59.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |