Os11g0106900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lateral organ boundaries, LOB domain containing protein.
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Os11g0106900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lateral organ boundaries, LOB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.07 | 0.725 | 7.5 | -2.63 | 4.74 | 0.733 | 1.43 | 2.31 | -1.05 | 5.74 | 10.22 | 269 | -- | -- |
| 255.32 | 0.744 | 7.5 | -2.68 | 4.76 | 0.811 | 0.521 | -- | -1.05 | 5.71 | 11.51 | 252 | -- | -- |
| 242.01 | 0.725 | 7.5 | -2.63 | 4.71 | 0.73 | -- | 1.85 | -1.05 | 5.71 | 10.24 | 242 | -- | -- |
| 255.13 | 0.744 | 7.51 | -2.68 | 4.71 | 0.759 | -- | -- | -1.09 | 5.74 | 10.93 | 252 | -- | -- |
| 1218.75 | 1.63 | 7.6 | -2.33 | -- | 0.641 | -- | 1.71 | -1.01 | -- | 16.38 | 1467 | -- | -- |
| 264.48 | 0.762 | 7.5 | -2.56 | 4.33 | -- | 0.703 | -- | -1.02 | 6.25 | -- | -- | -- | -- |
| 265.67 | 0.763 | 7.5 | -2.56 | 4.34 | -- | -- | -- | -1.02 | 6.23 | -- | -- | -- | -- |
| 1215.04 | 1.62 | 7.6 | -2.57 | -- | 0.773 | -- | -- | -1.07 | -- | 26.35 | 1422 | -- | -- |
| 418.19 | 0.952 | 7.45 | -- | 5.12 | 1.15 | -- | -- | -0.905 | 5.87 | 10 | 490 | -- | -- |
| 1240.76 | 1.65 | 7.58 | -2.44 | -- | -- | -- | -- | -0.926 | -- | -- | -- | -- | -- |
| 438.09 | 0.979 | 7.44 | -- | 4.3 | -- | -- | -- | -0.736 | 6.26 | -- | -- | -- | -- |
| 1356.15 | 1.72 | 7.52 | -- | -- | 0.964 | -- | -- | -0.776 | -- | 9.555 | 2897 | -- | -- |
| 1397.69 | 1.75 | 7.52 | -- | -- | -- | -- | -- | -0.656 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.72 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 2 | 232.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 11 | 12 |
| 8 | 232.67 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 10 | 232.72 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 19 |
| 17 | 233.85 | radiation | 20 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 19 | 234.00 | radiation | 10 | 90 | < th | dose independent | rect. | 7 | 20 |
| 20 | 234.09 | humidity | 50 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 22 | 234.17 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 5 | 12 |
| 29 | 234.40 | humidity | 70 | 720 | > th | dose independent | rect. | 12 | 13 |
| 33 | 234.46 | radiation | 30 | 270 | < th | dose independent | rect. | 12 | 13 |
| 41 | 234.54 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 22 |
| 44 | 234.68 | radiation | 20 | 90 | < th | dose dependent | rect. | 7 | 18 |
| 50 | 234.81 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 9 |
| 70 | 234.90 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 1 |
| 71 | 234.92 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 14 |
| 73 | 234.94 | radiation | 10 | 90 | < th | dose independent | rect. | 9 | 16 |
| 74 | 234.95 | humidity | 90 | 270 | < th | dose independent | rect. | 9 | 10 |
| 78 | 235.03 | radiation | 10 | 90 | < th | dose independent | rect. | 5 | 22 |
| 85 | 235.11 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 4 |
| 92 | 235.25 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 22 |
| 101 | 235.39 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 3 |
| 103 | 235.39 | radiation | 20 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 104 | 235.40 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 3 |
| 105 | 235.42 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 1 |
| 111 | 235.49 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 12 |
| 114 | 235.51 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 10 |
| 147 | 235.72 | humidity | 80 | 90 | < th | dose independent | rect. | 11 | 8 |
| 159 | 235.89 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 167 | 235.98 | radiation | 10 | 90 | < th | dose independent | rect. | 11 | 16 |
| 183 | 236.10 | radiation | 10 | 270 | > th | dose independent | sin | 22 | NA |
| 186 | 236.13 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 198 | 236.22 | radiation | 20 | 90 | < th | dose dependent | rect. | 11 | 14 |
| 202 | 236.26 | atmosphere | 995 | 720 | > th | dose independent | rect. | 13 | 3 |
| 204 | 236.26 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 205 | 236.27 | radiation | 20 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 223 | 236.39 | radiation | 10 | 270 | < th | dose independent | rect. | 19 | 23 |
| 244 | 236.54 | temperature | 20 | 10 | > th | dose independent | rect. | 10 | 13 |
| 256 | 236.65 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 258 | 236.66 | temperature | 30 | 30 | < th | dose independent | rect. | 15 | 12 |
| 264 | 236.73 | atmosphere | 1015 | 10 | < th | dose dependent | sin | 3 | NA |
| 268 | 236.75 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 22 |
| 282 | 236.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 324 | 237.07 | radiation | 40 | 90 | < th | dose dependent | rect. | 13 | 12 |
| 375 | 237.31 | humidity | 70 | 720 | > th | dose independent | sin | 17 | NA |
| 381 | 237.33 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 400 | 237.41 | radiation | 10 | 720 | > th | dose independent | rect. | 9 | 3 |
| 420 | 237.46 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 449 | 237.49 | humidity | 50 | 720 | > th | dose independent | rect. | 4 | 13 |
| 455 | 237.51 | radiation | 10 | 720 | > th | dose independent | rect. | 10 | 1 |
| 457 | 237.52 | temperature | 30 | 720 | < th | dose independent | sin | 23 | NA |
| 473 | 237.58 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 1 |
| 496 | 237.68 | atmosphere | 995 | 720 | > th | dose independent | rect. | 4 | 13 |
| 497 | 237.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 11 | 9 |
| 499 | 237.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 4 |
| 526 | 237.76 | radiation | 10 | 270 | < th | dose independent | rect. | 10 | 22 |
| 534 | 237.79 | humidity | 50 | 720 | > th | dose independent | rect. | 5 | 11 |
| 591 | 237.98 | radiation | 20 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 607 | 238.03 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 11 |
| 620 | 238.09 | atmosphere | 1015 | 720 | < th | dose dependent | sin | 7 | NA |
| 642 | 238.15 | humidity | 80 | 10 | < th | dose independent | rect. | 10 | 14 |
| 645 | 238.16 | radiation | 10 | 270 | > th | dose independent | no | NA | NA |
| 730 | 238.18 | atmosphere | 995 | 720 | > th | dose independent | rect. | 5 | 11 |
| 747 | 238.23 | temperature | 10 | 10 | > th | dose dependent | sin | 19 | NA |
| 749 | 238.24 | atmosphere | 995 | 720 | > th | dose independent | rect. | 13 | 12 |
| 777 | 238.29 | humidity | 80 | 10 | > th | dose independent | rect. | 8 | 19 |
| 779 | 238.30 | humidity | 80 | 10 | < th | dose independent | sin | 20 | NA |
| 783 | 238.31 | humidity | 60 | 90 | > th | dose independent | rect. | 14 | 11 |
| 803 | 238.36 | humidity | 50 | 720 | > th | dose dependent | sin | 19 | NA |
| 827 | 238.40 | radiation | 1 | 10 | < th | dose independent | rect. | 7 | 20 |
| 844 | 238.45 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 21 |
| 861 | 238.49 | atmosphere | 995 | 720 | > th | dose independent | rect. | 5 | 20 |
| 875 | 238.52 | radiation | 1 | 10 | < th | dose independent | rect. | 15 | 12 |
| 943 | 238.67 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 16 |
| 969 | 238.71 | atmosphere | 995 | 720 | > th | dose independent | rect. | 15 | 1 |
| 974 | 238.72 | humidity | 80 | 90 | < th | dose independent | rect. | 10 | 15 |
| 975 | 238.72 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 21 | 15 |
| 990 | 238.75 | temperature | 20 | 720 | > th | dose independent | rect. | 9 | 4 |