Os11g0106700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ferritin 1, chloroplast precursor (EC 1.16.3.1) (ZmFer1).
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Os11g0106700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ferritin 1, chloroplast precursor (EC 1.16.3.1) (ZmFer1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.05 | 0.674 | 14.9 | -1.29 | 2.01 | -0.869 | 0.579 | -4.08 | -0.536 | 10.6 | 1.08 | 4308 | -- | -- |
| 201.12 | 0.661 | 14.7 | -0.318 | 2.01 | -0.919 | 0.0143 | -- | 0.0332 | 10.8 | 2.529 | 24661 | -- | -- |
| 206.78 | 0.67 | 14.9 | -1.29 | 2.01 | -0.876 | -- | -4.31 | -0.535 | 10.6 | 1.08 | 4274 | -- | -- |
| 199.91 | 0.659 | 14.7 | -0.165 | 2 | -0.919 | -- | -- | 0.0184 | 10.6 | 2.333 | 23027 | -- | -- |
| 273.53 | 0.774 | 14.8 | -0.518 | -- | 1.39 | -- | 0.281 | -0.52 | -- | 1.08 | 4274 | -- | -- |
| 232.94 | 0.716 | 14.8 | -0.489 | 2.04 | -- | 0.675 | -- | -0.482 | 10.7 | -- | -- | -- | -- |
| 234.83 | 0.718 | 14.8 | -0.462 | 2.04 | -- | -- | -- | -0.481 | 10.7 | -- | -- | -- | -- |
| 274.04 | 0.774 | 14.9 | -0.521 | -- | 1.39 | -- | -- | -0.521 | -- | 1.08 | 4274 | -- | -- |
| 197.93 | 0.655 | 14.7 | -- | 1.97 | -1.17 | -- | -- | 0.0565 | 10.6 | 2.51 | 25837 | -- | -- |
| 492.06 | 1.04 | 14.8 | -0.502 | -- | -- | -- | -- | -0.492 | -- | -- | -- | -- | -- |
| 240.45 | 0.725 | 14.8 | -- | 2.04 | -- | -- | -- | -0.429 | 10.7 | -- | -- | -- | -- |
| 281.19 | 0.784 | 14.8 | -- | -- | 1.39 | -- | -- | -0.463 | -- | 1.08 | 4274 | -- | -- |
| 498.7 | 1.04 | 14.8 | -- | -- | -- | -- | -- | -0.436 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 5 | 191.92 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 6 | 192.01 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 8 | 192.16 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 14 | 192.42 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 26 | 192.76 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 44 | 193.06 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 81 | 193.91 | humidity | 80.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 103 | 194.36 | humidity | 80.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 196 | 195.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 15 |
| 204 | 195.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 15 |
| 221 | 195.75 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 228 | 195.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 249 | 195.97 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 252 | 196.01 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 8 |
| 258 | 196.04 | temperature | 25.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 268 | 196.09 | temperature | 25.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 355 | 196.47 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 420 | 196.70 | temperature | 25.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 435 | 196.75 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 444 | 196.77 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 453 | 196.79 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 10 |
| 460 | 196.82 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 10 |
| 465 | 196.82 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 487 | 196.88 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 498 | 196.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 10 |
| 552 | 197.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 14 |
| 607 | 197.20 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 13 |
| 620 | 197.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 622 | 197.23 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 626 | 197.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 670 | 197.31 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 671 | 197.31 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 672 | 197.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 675 | 197.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 685 | 197.33 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 700 | 197.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 726 | 197.39 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 727 | 197.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 731 | 197.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 736 | 197.40 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 751 | 197.42 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 7 | NA |
| 752 | 197.42 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 7 | NA |
| 756 | 197.42 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 7 | NA |
| 761 | 197.43 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 785 | 197.46 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 6 | NA |
| 825 | 197.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 830 | 197.51 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 835 | 197.52 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 914 | 197.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 917 | 197.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 976 | 197.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 996 | 197.70 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |