Os11g0105800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidate cytidylyltransferase family protein.
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Os11g0105800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidate cytidylyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.31 | 0.562 | 8.29 | 0.232 | 1.86 | -1.89 | 0.428 | 0.252 | -0.399 | 8.44 | 29.67 | 30 | -- | -- |
| 143.4 | 0.558 | 8.28 | 0.27 | 1.86 | -1.9 | 0.407 | -- | -0.39 | 8.43 | 29.64 | 29 | -- | -- |
| 143.87 | 0.559 | 8.29 | 0.267 | 1.86 | -1.89 | -- | 0.126 | -0.395 | 8.45 | 29.6 | 30 | -- | -- |
| 143.88 | 0.559 | 8.28 | 0.29 | 1.86 | -1.88 | -- | -- | -0.386 | 8.45 | 29.6 | 30 | -- | -- |
| 327.15 | 0.847 | 8.35 | 0.198 | -- | -2.15 | -- | 0.28 | -0.43 | -- | 29.4 | 17 | -- | -- |
| 191.63 | 0.649 | 8.19 | 0.735 | 1.97 | -- | 0.3 | -- | -0.00788 | 9.69 | -- | -- | -- | -- |
| 191.97 | 0.649 | 8.19 | 0.746 | 1.97 | -- | -- | -- | -0.00738 | 9.69 | -- | -- | -- | -- |
| 327.06 | 0.846 | 8.34 | 0.246 | -- | -2.15 | -- | -- | -0.416 | -- | 29.4 | 8 | -- | -- |
| 145.98 | 0.563 | 8.29 | -- | 1.85 | -1.96 | -- | -- | -0.409 | 8.35 | 29.67 | 29 | -- | -- |
| 423.19 | 0.961 | 8.25 | 0.728 | -- | -- | -- | -- | -0.00442 | -- | -- | -- | -- | -- |
| 206.64 | 0.672 | 8.21 | -- | 1.97 | -- | -- | -- | -0.0905 | 9.66 | -- | -- | -- | -- |
| 328.42 | 0.844 | 8.35 | -- | -- | -2.22 | -- | -- | -0.468 | -- | 29.27 | 2 | -- | -- |
| 437.18 | 0.976 | 8.27 | -- | -- | -- | -- | -- | -0.0852 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.47 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 9 | 140.19 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 11 | 141.34 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 12 | 141.42 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 19 | 141.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 25 | 143.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 29 | 143.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 30 | 143.31 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 31 | 143.33 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 34 | 143.43 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 36 | 143.54 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 38 | 143.59 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 39 | 143.62 | temperature | 20.0 | 10 | > th | dose dependent | no | NA | NA |
| 46 | 143.95 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 51 | 144.22 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 54 | 144.37 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 55 | 144.40 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 64 | 144.62 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 114 | 145.35 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 118 | 145.37 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 135 | 145.46 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 142 | 145.52 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 182 | 145.78 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 223 | 146.04 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 227 | 146.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 330 | 146.46 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 331 | 146.46 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 343 | 146.49 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 413 | 146.63 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 416 | 146.65 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 494 | 146.82 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 500 | 146.84 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 535 | 146.89 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 543 | 146.90 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 553 | 146.93 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 579 | 146.98 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 613 | 147.05 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 614 | 147.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 617 | 147.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 632 | 147.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 637 | 147.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 653 | 147.10 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 694 | 147.15 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 13 |
| 696 | 147.16 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 846 | 147.33 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 871 | 147.37 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 16 |
| 897 | 147.40 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 8 | 11 |